Gene: Lsat_1_v5_gn_1_23421

General Information

Structural Information

Species Lactuca sativa
Gene Identifier Lsat_1_v5_gn_1_23421
Transcript Identifier Lsat_1_v5_gn_1_23421.2
Gene Type Coding gene
Location Lsat_1_v8_lg_1 : 27622267-27625377 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000702
#Genes/#Species 815/100
Phylogenetic origin

ID ORTHO05D001796
#Genes/#Species 354/97
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id Lsat_1_v5_gn_1_23421.v5
pacid 38948360

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0030001	IEA	InterPro	metal ion transport
GO:0006828	ISO	PLAZA Integrative Orthology	manganese ion transport	AT1G47240
GO:0071421	ISO	PLAZA Integrative Orthology	manganese ion transmembrane transport	AT1G47240
GO:0071287	ISO	PLAZA Integrative Orthology	cellular response to manganese ion	AT1G47240
GO:0048767	ISO	PLAZA Integrative Orthology	root hair elongation	AT1G47240
GO:0010015	ISO	PLAZA Integrative Orthology	root morphogenesis	AT1G47240
GO:0051512	ISO	PLAZA Integrative Orthology	positive regulation of unidimensional cell growth	AT1G47240

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0046873	IEA	InterPro	metal ion transmembrane transporter activity
GO:0005384	ISO	PLAZA Integrative Orthology	manganese ion transmembrane transporter activity	AT1G47240

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016020	IEA	InterPro	membrane
GO:0005802	ISO	PLAZA Integrative Orthology	trans-Golgi network	AT1G47240

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001046	NRAMP family

Mapman id	Description
24.2.3.10	Solute transport.carrier-mediated transport.APC superfamily.metal cation transporter (NRAMP)