Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p19710 Brassica napus
A06p36090 Brassica napus
A09p06210 Brassica napus
Aa31LG11G4530 Aethionema arabicum
Aa31LG1G15450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3517 Anthoceros agrestis
Actinidia07423 Actinidia chinensis
Actinidia13237 Actinidia chinensis
Actinidia21979 Actinidia chinensis
Actinidia22346 Actinidia chinensis
Actinidia25098 Actinidia chinensis
Actinidia26390 Actinidia chinensis
Actinidia26391 Actinidia chinensis
Actinidia40478 Actinidia chinensis
Ah.09g226310 Amaranthus hybridus
Ah.12g055710 Amaranthus hybridus
AL4G16910 Arabidopsis lyrata
AL6G37080 Arabidopsis lyrata
Aqoxy4G02446 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.45B7J4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G4JMEM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H50X8V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HN94BD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PS1TRN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y2W1T6 Arachis hypogaea
AT2G25490 Arabidopsis thaliana
AT5G25350 Arabidopsis thaliana
ATR0620G146 Amborella trichopoda
ATR1120G141 Amborella trichopoda
Atru.chr7.1138 Acer truncatum
Atru.chr7.2422 Acer truncatum
AUR62011140 Chenopodium quinoa
AUR62012391 Chenopodium quinoa
AUR62013347 Chenopodium quinoa
AUR62031513 Chenopodium quinoa
BcaB04g19793 Brassica carinata
BcaB06g28063 Brassica carinata
BcaC02g08348 Brassica carinata
BcaC04g23552 Brassica carinata
BcaC04g23581 Brassica carinata
BcaNung02271 Brassica carinata
BcaNung03217 Brassica carinata
BolC4t27072H Brassica oleracea
BolC9t53606H Brassica oleracea
BraA04t17561Z Brassica rapa
BraA09t36265Z Brassica rapa
C04p55360 Brassica napus
C07p42490 Brassica napus
C09p06860 Brassica napus
CAN.G1230.8 Capsicum annuum
CAN.G347.8 Capsicum annuum
CAN.G403.16 Capsicum annuum
CAN.G551.86 Capsicum annuum
CAN.G836.4 Capsicum annuum
CANSAT11G1951 Cannabis sativa
CANSAT25G1230 Cannabis sativa
CARHR115980 Cardamine hirsuta
CARHR188070 Cardamine hirsuta
Carub.0004s0519 Capsella rubella
Carub.0006s2317 Capsella rubella
Ca_13027_v3 Cicer arietinum L.
Ca_15735_v3 Cicer arietinum L.
Ca_21672_v3 Cicer arietinum L.
Ca_29667_v3 Cicer arietinum L.
CBR_g8969 Chara braunii
Cc06_g08370 Coffea canephora
Cc08_g00670 Coffea canephora
CDE03G0150 Ceratophyllum demersum
CDE04G2949 Ceratophyllum demersum
CDE06G2759 Ceratophyllum demersum
CDE07G0417 Ceratophyllum demersum
Cfa003388 Carpinus fangiana
Cfa013148 Carpinus fangiana
Cfa013149 Carpinus fangiana
Ciclev10007708m.g Citrus clementina
Ciclev10007739m.g Citrus clementina
CiPaw.03G245100 Carya illinoinensis
CiPaw.04G172200 Carya illinoinensis
CiPaw.07G222900 Carya illinoinensis
ClCG05G016910 Citrullus lanatus
ClCG06G011230 Citrullus lanatus
ClCG08G013350 Citrullus lanatus
ClCG11G003110 Citrullus lanatus
COL.COLO4_18854 Corchorus olitorius
COL.COLO4_35110 Corchorus olitorius
Cpa.g.sc46.9 Carica papaya
Cpa.g.sc750.1 Carica papaya
Cre16.g688863 Chlamydomonas reinhardtii
CsaV3_1G030250 Cucumis sativus L.
CsaV3_2G002930 Cucumis sativus L.
CsaV3_2G032070 Cucumis sativus L.
CsaV3_3G046430 Cucumis sativus L.
CSS0002896 Camellia sinensis var. sinensis
CSS0022348 Camellia sinensis var. sinensis
CSS0044162 Camellia sinensis var. sinensis
DCAR_006219 Daucus carota
DCAR_014888 Daucus carota
DCAR_017808 Daucus carota
Dinv08656 Davidia involucrata
Dinv30141 Davidia involucrata
Dinv36515 Davidia involucrata
Dinv41502 Davidia involucrata
Duzib150G1552 Durio zibethinus
Duzib150G1574 Durio zibethinus
Duzib168G0621 Durio zibethinus
Duzib168G0984 Durio zibethinus
Duzib187G0172 Durio zibethinus
ECA233G5416 Erigeron canadensis
ECA234G2999 Erigeron canadensis
ECA240G0561 Erigeron canadensis
ECA248G1832 Erigeron canadensis
EL10Ac2g04226 Beta vulgaris
EL10Ac8g18674 Beta vulgaris
Eucgr.C01334 Eucalyptus grandis
Eucgr.C01524 Eucalyptus grandis
Eucgr.C01744 Eucalyptus grandis
Eucgr.C02778 Eucalyptus grandis
FAN15G2215 Fragaria x ananassa
FAN19G2720 Fragaria x ananassa
FAN20G0970 Fragaria x ananassa
FAN23G2214 Fragaria x ananassa
FAN23G2246 Fragaria x ananassa
FAN24G2581 Fragaria x ananassa
FAN26G3031 Fragaria x ananassa
FAN27G3289 Fragaria x ananassa
FAN28G2565 Fragaria x ananassa
FvH4_1g03130 Fragaria vesca
FvH4_2g29100 Fragaria vesca
Glyma.04G066900 Glycine max
Glyma.04G147000 Glycine max
Glyma.06G068400 Glycine max
Glyma.13G166200 Glycine max
Glyma.14G116800 Glycine max
Glyma.17G113900 Glycine max
Glyma.17G211000 Glycine max
Gohir.A05G015800 Gossypium hirsutum
Gohir.A05G054000 Gossypium hirsutum
Gohir.A06G098214 Gossypium hirsutum
Gohir.A07G027900 Gossypium hirsutum
Gohir.A07G036300 Gossypium hirsutum
Gohir.A08G238500 Gossypium hirsutum
Gohir.A13G181600 Gossypium hirsutum
Gohir.D05G016900 Gossypium hirsutum
Gohir.D05G057000 Gossypium hirsutum
Gohir.D06G100000 Gossypium hirsutum
Gohir.D07G032000 Gossypium hirsutum
Gohir.D07G040300 Gossypium hirsutum
Gohir.D08G259200 Gossypium hirsutum
Gohir.D13G189400 Gossypium hirsutum
Gorai.001G033400 Gossypium raimondii
Gorai.001G042600 Gossypium raimondii
Gorai.004G276800 Gossypium raimondii
Gorai.009G017100 Gossypium raimondii
Gorai.009G058000 Gossypium raimondii
Gorai.010G114900 Gossypium raimondii
Gorai.013G215000 Gossypium raimondii
GSVIVG01015548001 Vitis vinifera
GSVIVG01035856001 Vitis vinifera
HanXRQChr01g0030871 Helianthus annuus
HanXRQChr08g0217381 Helianthus annuus
HanXRQChr08g0217391 Helianthus annuus
HanXRQChr09g0242011 Helianthus annuus
HanXRQChr10g0315601 Helianthus annuus
HanXRQChr11g0349841 Helianthus annuus
HanXRQChr12g0356231 Helianthus annuus
HanXRQChr13g0402931 Helianthus annuus
Haze_16182 Corylus avellana
Haze_21523 Corylus avellana
Haze_25564 Corylus avellana
Hma1.2p1_0931F.1_g238070 Hydrangea macrophylla
HPP92_002753 Vanilla planifolia
HPP92_027755 Vanilla planifolia
Hund04529 Selenicereus undatus
Hund09252 Selenicereus undatus
Hund26512 Selenicereus undatus
Lalb_Chr07g0179011 Lupinus albus
Lalb_Chr08g0244081 Lupinus albus
Lalb_Chr11g0063741 Lupinus albus
Lalb_Chr13g0301801 Lupinus albus
Lalb_Chr22g0361481 Lupinus albus
Lalb_Chr23g0268531 Lupinus albus
Lj1g0020083 Lotus japonicus
Lj4g0020127 Lotus japonicus
Lj5g0018813 Lotus japonicus
Lj7C422T7 Lonicera japonica
Lj7P722T34 Lonicera japonica
Lsat_1_v5_gn_1_43380 Lactuca sativa
Lsat_1_v5_gn_5_95460 Lactuca sativa
Lsat_1_v5_gn_6_21521 Lactuca sativa
Lsat_1_v5_gn_7_45101 Lactuca sativa
Lsat_1_v5_gn_8_65341 Lactuca sativa
Manes.03G015100 Manihot esculenta
Manes.06G057800 Manihot esculenta
Manes.14G133100 Manihot esculenta
Mapoly0013s0206 Marchantia polymorpha
MBI01_g38637_MAGBIO Magnolia biondii
MBI04_g24602_MAGBIO Magnolia biondii
MBI04_g25313_MAGBIO Magnolia biondii
MBI12_g07083_MAGBIO Magnolia biondii
MD02G1030300 Malus domestica
MD08G1150200 Malus domestica
MD15G1171800 Malus domestica
Medtr1g012520 Medicago truncatula
Medtr3g107280 Medicago truncatula
Medtr4g114640 Medicago truncatula
Medtr4g114650 Medicago truncatula
MELO3C003696.2 Cucumis melo
MELO3C004498.2 Cucumis melo
MELO3C010335.2 Cucumis melo
MELO3C011260.2 Cucumis melo
Migut.A00045 Erythranthe guttata
Migut.E01799 Erythranthe guttata
Migut.K00447 Erythranthe guttata
MSTRG.11619 Avicennia marina
Nitab4.5_0000028g0350 Nicotiana tabacum
Nitab4.5_0000209g0110 Nicotiana tabacum
Nitab4.5_0001349g0130 Nicotiana tabacum
Nitab4.5_0004209g0030 Nicotiana tabacum
Nitab4.5_0004783g0020 Nicotiana tabacum
Nitab4.5_0007912g0010 Nicotiana tabacum
Nn2g12049 Nelumbo nucifera
Nn2g13151 Nelumbo nucifera
Nn3g18826 Nelumbo nucifera
Nn8g39470 Nelumbo nucifera
Oeu002054.1 Olea europaea
Oeu038189.1 Olea europaea
Oeu042698.1 Olea europaea
Oeu044200.1 Olea europaea
Oeu052494.1 Olea europaea
Oeu057299.1 Olea europaea
Oeu058048.2 Olea europaea
Os02g0200900 Oryza sativa ssp. japonica
Os06g0605900 Oryza sativa ssp. japonica
Peaxi162Scf00046g00718 Petunia axillaris
Peaxi162Scf00313g00914 Petunia axillaris
Peaxi162Scf00785g00036 Petunia axillaris
PGR044G2221 Punica granatum
PGR142G1182 Punica granatum
PGSC0003DMG400002914 Solanum tuberosum
PGSC0003DMG400015853 Solanum tuberosum
PGSC0003DMG400016653 Solanum tuberosum
PGSC0003DMG400030523 Solanum tuberosum
PGSC0003DMG400030525 Solanum tuberosum
PGSC0003DMG400030928 Solanum tuberosum
PGSC0003DMG400039004 Solanum tuberosum
PGSC0003DMG400040644 Solanum tuberosum
PGSC0003DMG400044406 Solanum tuberosum
PGSC0003DMG402020463 Solanum tuberosum
Phvul.001G051300 Phaseolus vulgaris
Phvul.003G165500 Phaseolus vulgaris
Phvul.009G080700 Phaseolus vulgaris
Phvul.009G093200 Phaseolus vulgaris
Phvul.009G207300 Phaseolus vulgaris
Potri.006G068500 Populus trichocarpa
Potri.006G254100 Populus trichocarpa
Potri.018G027700 Populus trichocarpa
Potri.018G130800 Populus trichocarpa
Pp3c12_11790 Physcomitrium patens
Pp3c4_4760 Physcomitrium patens
Prupe.1G480700 Prunus persica
Prupe.7G244300 Prunus persica
Psat4g038160 Pisum sativum
Psat5g028720 Pisum sativum
Psat6g029200 Pisum sativum
PSO135G0201 Papaver somniferum
PSO135G0849 Papaver somniferum
PSO170G6471 Papaver somniferum
PSO384G0970 Papaver somniferum
PSO384G1403 Papaver somniferum
PSO455G0208 Papaver somniferum
QL02p021774 Quercus lobata
QL02p088692 Quercus lobata
RcHm_v2.0_Chr2g0088251 Rosa chinensis
RcHm_v2.0_Chr6g0297981 Rosa chinensis
Rhsim01G0068800 Rhododendron simsii
Rhsim02G0200300 Rhododendron simsii
Sabra06G0051000 Salix brachista
Sabra06G0198500 Salix brachista
Sabra18G0030000 Salix brachista
Sabra18G0111000 Salix brachista
SalBow1G1669 Salvia bowleyana
SalBow1G8562 Salvia bowleyana
SalBow4G3064 Salvia bowleyana
Sc08g0006530 Simmondsia chinensis
Sc09g0008280 Simmondsia chinensis
Sc23g0006750 Simmondsia chinensis
Sed0004605 Sechium edule
Sed0006430 Sechium edule
Sed0016247 Sechium edule
Sed0019326 Sechium edule
Sed0022700 Sechium edule
Sed0027138 Sechium edule
SEGI_00615 Sequoiadendron giganteum
SEGI_36646 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09131 Striga asiatica
SGA_v2.0_scaffold211G42146 Striga asiatica
SGA_v2.0_scaffold64G21927 Striga asiatica
SMO239G0049 Selaginella moellendorffii
SMO358G0477 Selaginella moellendorffii
Solyc01g010500.3 Solanum lycopersicum
Solyc05g008700.3 Solanum lycopersicum
Solyc05g008730.1 Solanum lycopersicum
Solyc06g030600.1 Solanum lycopersicum
Solyc06g049010.2 Solanum lycopersicum
Solyc07g008250.3 Solanum lycopersicum
Solyc08g060810.3 Solanum lycopersicum
Solyc12g009560.2 Solanum lycopersicum
Sopen01g006140 Solanum pennellii
Sopen06g015370 Solanum pennellii
Sopen07g004130 Solanum pennellii
Sopen08g015960 Solanum pennellii
Sopen12g004540 Solanum pennellii
Sp2g22190 Schrenkiella parvula
Sp4g04780 Schrenkiella parvula
TAR375G0950 Trochodendron aralioides
TAR383G0999 Trochodendron aralioides
TAR625G0638 Trochodendron aralioides
TAR636G1305 Trochodendron aralioides
THA.LOC104803662 Tarenaya hassleriana
THA.LOC104803838 Tarenaya hassleriana
THA.LOC104808984 Tarenaya hassleriana
THA.LOC104815018 Tarenaya hassleriana
THA.LOC104815275 Tarenaya hassleriana
THA.LOC104824612 Tarenaya hassleriana
Thecc.09G025300 Theobroma cacao
Thecc.09G127800 Theobroma cacao
Thhalv10000087m.g Eutrema salsugineum
Thhalv10003828m.g Eutrema salsugineum
TPR.G15644 Trifolium pratense
TPR.G20941 Trifolium pratense
TPR.G26475 Trifolium pratense
TPR.G3137 Trifolium pratense
TWI32G0164 Tripterygium wilfordii
TWI32G0358 Tripterygium wilfordii
TWI34G0540 Tripterygium wilfordii
TWI34G0861 Tripterygium wilfordii
TWI63G0282 Tripterygium wilfordii
unitig_749.g13836 Utricularia gibba
unitig_899.g15093 Utricularia gibba
unitig_899.g15441 Utricularia gibba
vmacro05179 Vaccinium macrocarpon
vmacro11170 Vaccinium macrocarpon
vmacro20567 Vaccinium macrocarpon
VMungo0647G1900 Vigna mungo
VMungo1215G2275 Vigna mungo
VMungo1215G2938 Vigna mungo
VMungo1309G0588 Vigna mungo
VMungo1309G2693 Vigna mungo
Zm00001eb011850 Zea mays
Zm00001eb205780 Zea mays
Zm00001eb235810 Zea mays
Zm00001eb276590 Zea mays
Zm00001eb280260 Zea mays
Zm00001eb335950 Zea mays
Zm00001eb336510 Zea mays
Zm00001eb386390 Zea mays

User provided reference genes

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