Gene: Sopen12g004540

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g004540
  • Transcript Identifier Sopen12g004540.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 3090722-3093494 : positive

Gene Family Information

  • ID HOM05D001818
  • #Genes/#Species 360/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g004540.1

Descriptions

  • Description Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | EIN3-binding F box protein 1 (EBF1) | CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like , F-box domain, Skp2-like , Leucine-rich repeat, cysteine-containing subtype | BEST Arabidopsis thaliana protein match is: EIN3-binding F box protein 2
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010260
ISO
PLAZA Integrative Orthologyanimal organ senescence Solyc12g009560.2
GO:0010105
ISO
PLAZA Integrative Orthologynegative regulation of ethylene-activated signaling pathway AT5G25350
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene Solyc12g009560.2
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin Solyc12g009560.2
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT5G25350

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G25350
GO:0019005
ISO
PLAZA Integrative OrthologySCF ubiquitin ligase complex AT5G25350

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001810 F-box domain
IPR032675 Leucine-rich repeat domain superfamily
IPR001611 Leucine-rich repeat
IPR036047 F-box-like domain superfamily
IPR006553 Leucine-rich repeat, cysteine-containing subtype
Mapman id Description
11.5.2.9 Phytohormone action.ethylene.perception and signal transduction.EIN3-substrate-adaptor of SCF ubiquitin protein ligase complex (EBF)