Gene: AT5G25350

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G25350
  • Transcript Identifier AT5G25350.1
  • Gene Type Coding gene
  • Location Chr5 : 8794842-8796882 : negative

Gene Family Information

  • ID HOM05D001818
  • #Genes/#Species 360/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G25350.1
  • symbol EBF2
  • uniprot Q708Y0

Descriptions

  • Description EIN3-binding F box protein 2
  • Computational description EIN3-binding F box protein 2 (EBF2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: EIN3-binding F box protein 1 (TAIR:AT2G25490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0006511
TAS
Gene Ontologyubiquitin-dependent protein catabolic process1
GO:0009723
IMP
Gene Ontologyresponse to ethylene1
GO:0010105
TAS
Gene Ontologynegative regulation of ethylene-activated signaling pathway1
GO:0031146
IBA
Gene OntologySCF-dependent proteasomal ubiquitin-dependent protein catabolic process2
GO:0009873
IEA
GOA Databaseethylene-activated signaling pathway
GO:0010260
ISO
PLAZA Integrative Orthologyanimal organ senescence Solyc12g009560.2
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin Solyc08g060810.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
TAS
Gene Ontologynucleus1 3
GO:0019005
IPI
IBA
Gene OntologySCF ubiquitin ligase complex2 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036047 F-box-like domain superfamily
IPR001810 F-box domain
IPR032675 Leucine-rich repeat domain superfamily
IPR001611 Leucine-rich repeat
IPR006553 Leucine-rich repeat, cysteine-containing subtype
Mapman id Description
11.5.2.9 Phytohormone action.ethylene.perception and signal transduction.EIN3-substrate-adaptor of SCF ubiquitin protein ligase complex (EBF)