Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p11510 Brassica napus
A07p11970 Brassica napus
A08p25970 Brassica napus
A08p26420 Brassica napus
A08p33430 Brassica napus
A09p38210 Brassica napus
A09p38630 Brassica napus
Aa31LG1G3190 Aethionema arabicum
Aa31LG7G9890 Aethionema arabicum
Aa31sc797G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2979 Anthoceros agrestis
Actinidia04436 Actinidia chinensis
Actinidia05898 Actinidia chinensis
Actinidia09640 Actinidia chinensis
Actinidia11842 Actinidia chinensis
Actinidia34030 Actinidia chinensis
Actinidia36208 Actinidia chinensis
Ah.02g130840 Amaranthus hybridus
AL1G40710 Arabidopsis lyrata
AL1G41460 Arabidopsis lyrata
Aqoxy1G03671 Aquilegia oxysepala
Aqoxy3G01575 Aquilegia oxysepala
Aqoxy5G03325 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.35IJJB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4PQU0W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K2C0HG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PNH0UK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W9M7YL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YNM6HM Arachis hypogaea
AT1G11570 Arabidopsis thaliana
AT1G27310 Arabidopsis thaliana
AT1G27970 Arabidopsis thaliana
ATR0561G147 Amborella trichopoda
ATR0697G237 Amborella trichopoda
Atru.chr10.2155 Acer truncatum
Atru.chr11.2342 Acer truncatum
AUR62003443 Chenopodium quinoa
AUR62005636 Chenopodium quinoa
AUR62021998 Chenopodium quinoa
AUR62028913 Chenopodium quinoa
AUR62029401 Chenopodium quinoa
BcaB01g02868 Brassica carinata
BcaB03g12072 Brassica carinata
BcaB03g13252 Brassica carinata
BcaB03g13962 Brassica carinata
BcaC01g01623 Brassica carinata
BcaC05g26546 Brassica carinata
BcaC05g26609 Brassica carinata
BcaC05g26737 Brassica carinata
BcaC05g26793 Brassica carinata
BcaC06g35325 Brassica carinata
BcaC07g38669 Brassica carinata
BcaNung06813 Brassica carinata
BolC3t19657H Brassica oleracea
BolC3t19716H Brassica oleracea
BolC5t31378H Brassica oleracea
BolC7t42242H Brassica oleracea
BolC7t42296H Brassica oleracea
BolC8t49102H Brassica oleracea
BraA07t28940Z Brassica rapa
BraA07t28982Z Brassica rapa
BraA08t34548Z Brassica rapa
BraA08t34594Z Brassica rapa
BraA08t35259Z Brassica rapa
BraA09t39334Z Brassica rapa
BraA09t39369Z Brassica rapa
C03p73660 Brassica napus
C03p74680 Brassica napus
C05p26010 Brassica napus
C05p26580 Brassica napus
C07p17380 Brassica napus
C07p17900 Brassica napus
C08p14540 Brassica napus
CAN.G1525.10 Capsicum annuum
CAN.G264.25 Capsicum annuum
CAN.G473.106 Capsicum annuum
CAN.G569.36 Capsicum annuum
CANSAT01G0056 Cannabis sativa
CANSAT01G2593 Cannabis sativa
CANSAT56G3218 Cannabis sativa
CARHR011850 Cardamine hirsuta
CARHR026880 Cardamine hirsuta
CARHR027400 Cardamine hirsuta
Carub.0001s1118 Capsella rubella
Carub.0001s2584 Capsella rubella
Carub.0001s2642 Capsella rubella
Ca_16449_v3 Cicer arietinum L.
Ca_18020_v3 Cicer arietinum L.
CBR_g28567 Chara braunii
Cc02_g11620 Coffea canephora
Cc07_g00920 Coffea canephora
Cc11_g17040 Coffea canephora
CDE02G1370 Ceratophyllum demersum
CDE05G0190 Ceratophyllum demersum
Cfa000265 Carpinus fangiana
Cfa007219 Carpinus fangiana
Cfa009376 Carpinus fangiana
Ciclev10016912m.g Citrus clementina
Ciclev10033081m.g Citrus clementina
CiPaw.03G056400 Carya illinoinensis
CiPaw.04G037100 Carya illinoinensis
CiPaw.05G108200 Carya illinoinensis
CiPaw.06G104000 Carya illinoinensis
CiPaw.10G068500 Carya illinoinensis
ClCG03G004950 Citrullus lanatus
ClCG07G015450 Citrullus lanatus
COL.COLO4_20423 Corchorus olitorius
COL.COLO4_31738 Corchorus olitorius
Cpa.g.sc198.14 Carica papaya
Cpa.g.sc43.74 Carica papaya
Cre07.g316000 Chlamydomonas reinhardtii
CsaV3_1G011010 Cucumis sativus L.
CsaV3_4G003040 Cucumis sativus L.
CSS0014483 Camellia sinensis var. sinensis
CSS0016243 Camellia sinensis var. sinensis
CSS0031052 Camellia sinensis var. sinensis
CSS0031114 Camellia sinensis var. sinensis
CSS0031777 Camellia sinensis var. sinensis
CSS0033020 Camellia sinensis var. sinensis
CSS0033749 Camellia sinensis var. sinensis
CSS0036936 Camellia sinensis var. sinensis
CSS0037485 Camellia sinensis var. sinensis
DCAR_004204 Daucus carota
DCAR_008133 Daucus carota
DCAR_011320 Daucus carota
DCAR_024673 Daucus carota
DCAR_024675 Daucus carota
DCAR_024677 Daucus carota
DCAR_026455 Daucus carota
Dinv11679 Davidia involucrata
Dinv17574 Davidia involucrata
Dinv17825 Davidia involucrata
Dinv25652 Davidia involucrata
Duzib192G0199 Durio zibethinus
Duzib235G0106 Durio zibethinus
Duzib251G0742 Durio zibethinus
Duzib268G0938 Durio zibethinus
Duzib268G1758 Durio zibethinus
ECA232G4776 Erigeron canadensis
ECA238G2947 Erigeron canadensis
ECA246G1303 Erigeron canadensis
ECA246G2780 Erigeron canadensis
ECA248G2384 Erigeron canadensis
EL10Ac6g13522 Beta vulgaris
EL10Ac6g15417 Beta vulgaris
EL10Ac8g20000 Beta vulgaris
Eucgr.B03507 Eucalyptus grandis
Eucgr.D01295 Eucalyptus grandis
Eucgr.H04097 Eucalyptus grandis
Eucgr.H04214 Eucalyptus grandis
Eucgr.H04527 Eucalyptus grandis
Eucgr.H04553 Eucalyptus grandis
Eucgr.H04554 Eucalyptus grandis
Eucgr.H04559 Eucalyptus grandis
Eucgr.H04565 Eucalyptus grandis
Eucgr.H04570 Eucalyptus grandis
Eucgr.H04624 Eucalyptus grandis
Eucgr.H04629 Eucalyptus grandis
Eucgr.H04631 Eucalyptus grandis
FAN07G1964 Fragaria x ananassa
FAN12G0674 Fragaria x ananassa
FAN17G2368 Fragaria x ananassa
FAN21G3777 Fragaria x ananassa
FAN25G3333 Fragaria x ananassa
FvH4_3g02550 Fragaria vesca
FvH4_4g23580 Fragaria vesca
Glyma.05G148200 Glycine max
Glyma.08G105100 Glycine max
Glyma.11G251700 Glycine max
Glyma.18G005300 Glycine max
Gohir.A01G154220 Gossypium hirsutum
Gohir.A03G124500 Gossypium hirsutum
Gohir.A05G168400 Gossypium hirsutum
Gohir.A05G310500 Gossypium hirsutum
Gohir.A10G014800 Gossypium hirsutum
Gohir.D01G110564 Gossypium hirsutum
Gohir.D01G146300 Gossypium hirsutum
Gohir.D02G147700 Gossypium hirsutum
Gohir.D05G171500 Gossypium hirsutum
Gohir.D05G311300 Gossypium hirsutum
Gohir.D05G345400 Gossypium hirsutum
Gohir.D10G014800 Gossypium hirsutum
Gorai.002G182000 Gossypium raimondii
Gorai.005G165500 Gossypium raimondii
Gorai.009G176600 Gossypium raimondii
Gorai.009G332400 Gossypium raimondii
Gorai.011G016400 Gossypium raimondii
HanXRQChr01g0003651 Helianthus annuus
HanXRQChr05g0128711 Helianthus annuus
HanXRQChr09g0256241 Helianthus annuus
HanXRQChr14g0450601 Helianthus annuus
HanXRQChr15g0477301 Helianthus annuus
HanXRQChr15g0486971 Helianthus annuus
HanXRQChr17g0550051 Helianthus annuus
Haze_06750 Corylus avellana
Haze_06758 Corylus avellana
Haze_12435 Corylus avellana
Haze_14886 Corylus avellana
Haze_26862 Corylus avellana
Hma1.2p1_0065F.1_g035310 Hydrangea macrophylla
Hma1.2p1_0091F.1_g046210 Hydrangea macrophylla
Hma1.2p1_0275F.1_g110630 Hydrangea macrophylla
HPP92_000345 Vanilla planifolia
HPP92_011753 Vanilla planifolia
HPP92_011775 Vanilla planifolia
HPP92_013608 Vanilla planifolia
Hund04282 Selenicereus undatus
Hund06099 Selenicereus undatus
Hund21380 Selenicereus undatus
Lalb_Chr11g0075801 Lupinus albus
Lalb_Chr12g0206041 Lupinus albus
Lj4g0003142 Lotus japonicus
Lj6C828T5 Lonicera japonica
Lj6g0015522 Lotus japonicus
Lsat_1_v5_gn_0_2440 Lactuca sativa
Lsat_1_v5_gn_1_121421 Lactuca sativa
Lsat_1_v5_gn_3_30741 Lactuca sativa
Lsat_1_v5_gn_4_185021 Lactuca sativa
Manes.12G009700 Manihot esculenta
Manes.13G010400 Manihot esculenta
Manes.16G011400 Manihot esculenta
Mapoly0052s0064 Marchantia polymorpha
MBI07_g28245_MAGBIO Magnolia biondii
MBI11_g41399_MAGBIO Magnolia biondii
MBI19_g01203_MAGBIO Magnolia biondii
MCO01G692 Micromonas commoda
MD05G1341700 Malus domestica
MD10G1315300 Malus domestica
MD13G1121000 Malus domestica
MD16G1121000 Malus domestica
Medtr2g461940 Medicago truncatula
Medtr3g085070 Medicago truncatula
Medtr8g080790 Medicago truncatula
MELO3C002479.2 Cucumis melo
MELO3C017742.2 Cucumis melo
Migut.E00011 Erythranthe guttata
Migut.F00057 Erythranthe guttata
Migut.K01470 Erythranthe guttata
MSTRG.13305 Avicennia marina
MSTRG.494 Avicennia marina
Nitab4.5_0000559g0360 Nicotiana tabacum
Nitab4.5_0000760g0100 Nicotiana tabacum
Nitab4.5_0002050g0040 Nicotiana tabacum
Nitab4.5_0002347g0120 Nicotiana tabacum
Nitab4.5_0003376g0010 Nicotiana tabacum
Nitab4.5_0005161g0050 Nicotiana tabacum
Nitab4.5_0026204g0010 Nicotiana tabacum
Nn1g07052 Nelumbo nucifera
Nn3g16437 Nelumbo nucifera
Nn4g22287 Nelumbo nucifera
Oeu035235.1 Olea europaea
Oeu049144.1 Olea europaea
Oeu062529.1 Olea europaea
Os01g0788200 Oryza sativa ssp. japonica
Os08g0532300 Oryza sativa ssp. japonica
Peaxi162Scf00331g00310 Petunia axillaris
Peaxi162Scf00420g00548 Petunia axillaris
Peaxi162Scf00427g00113 Petunia axillaris
PGR004G0620 Punica granatum
PGR102G1308 Punica granatum
PGR119G2103 Punica granatum
PGSC0003DMG400002073 Solanum tuberosum
PGSC0003DMG400020251 Solanum tuberosum
PGSC0003DMG400030196 Solanum tuberosum
PGSC0003DMG400034308 Solanum tuberosum
Phvul.001G262800 Phaseolus vulgaris
Phvul.L002846 Phaseolus vulgaris
Potri.001G057500 Populus trichocarpa
Potri.003G170800 Populus trichocarpa
Potri.011G025500 Populus trichocarpa
Pp3c11_12220 Physcomitrium patens
Pp3c11_12240 Physcomitrium patens
Pp3c2_25620 Physcomitrium patens
Pp3c7_12750 Physcomitrium patens
PRCOL_00006132 Prasinoderma coloniale
Prupe.1G224200 Prunus persica
Prupe.4G025300 Prunus persica
Psat5g097360 Pisum sativum
Psat7g077320 Pisum sativum
PSO017G0659 Papaver somniferum
PSO017G7344 Papaver somniferum
PSO407G0344 Papaver somniferum
PSO478G0858 Papaver somniferum
PSO478G4295 Papaver somniferum
QL02p071155 Quercus lobata
QL03p052242 Quercus lobata
QL05p074731 Quercus lobata
RcHm_v2.0_Chr4g0429981 Rosa chinensis
RcHm_v2.0_Chr4g0430001 Rosa chinensis
RcHm_v2.0_Chr5g0003881 Rosa chinensis
Rhsim02G0111300 Rhododendron simsii
Rhsim08G0042300 Rhododendron simsii
Rhsim10G0005500 Rhododendron simsii
Sabra03G0124900 Salix brachista
Sabra11G0016100 Salix brachista
Sabra11G0021800 Salix brachista
SalBow4G0489 Salvia bowleyana
SalBow4G2270 Salvia bowleyana
SalBow8G4475 Salvia bowleyana
Sc04g0010230 Simmondsia chinensis
Sc14g0009110 Simmondsia chinensis
Sc17g0007110 Simmondsia chinensis
Sed0010267 Sechium edule
Sed0012557 Sechium edule
Sed0019629 Sechium edule
Sed0023971 Sechium edule
Sed0028210 Sechium edule
SEGI_17106 Sequoiadendron giganteum
SEGI_20943 Sequoiadendron giganteum
SEGI_31983 Sequoiadendron giganteum
SEGI_38775 Sequoiadendron giganteum
SGA_v2.0_scaffold391G50625 Striga asiatica
SGA_v2.0_scaffold44G16919 Striga asiatica
SGA_v2.0_scaffold87G27163 Striga asiatica
SMO340G0021 Selaginella moellendorffii
SMO347G0354 Selaginella moellendorffii
Solyc02g068150.4 Solanum lycopersicum
Solyc02g080190.3 Solanum lycopersicum
Solyc02g094200.3 Solanum lycopersicum
Solyc05g015630.3 Solanum lycopersicum
Sopen02g017260 Solanum pennellii
Sopen02g024910 Solanum pennellii
Sopen02g038830 Solanum pennellii
Sopen05g011090 Solanum pennellii
Sp1g10180 Schrenkiella parvula
Sp1g23550 Schrenkiella parvula
Sp1g24160 Schrenkiella parvula
TAR371G1096 Trochodendron aralioides
TAR622G1253 Trochodendron aralioides
TAR629G1203 Trochodendron aralioides
THA.LOC104807512 Tarenaya hassleriana
THA.LOC104809514 Tarenaya hassleriana
THA.LOC104814197 Tarenaya hassleriana
THA.LOC104825494 Tarenaya hassleriana
Thecc.02G205300 Theobroma cacao
Thecc.06G215200 Theobroma cacao
Thhalv10008965m.g Eutrema salsugineum
Thhalv10010016m.g Eutrema salsugineum
Thhalv10010039m.g Eutrema salsugineum
TPR.G17068 Trifolium pratense
TPR.G28 Trifolium pratense
TWI18G1053 Tripterygium wilfordii
TWI36G0147 Tripterygium wilfordii
TWI38G0445 Tripterygium wilfordii
TWI75G1016 Tripterygium wilfordii
unitig_0.g1926 Utricularia gibba
unitig_21.g20881 Utricularia gibba
unitig_748.g7067 Utricularia gibba
vmacro00576 Vaccinium macrocarpon
vmacro00577 Vaccinium macrocarpon
vmacro05966 Vaccinium macrocarpon
vmacro15826 Vaccinium macrocarpon
vmacro18352 Vaccinium macrocarpon
VMungo0251G0528 Vigna mungo
VMungo1383G0498 Vigna mungo
Zm00001eb036640 Zea mays
Zm00001eb151160 Zea mays
Zm00001eb175200 Zea mays

User provided reference genes

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