Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p27730 Brassica napus
A01p27810 Brassica napus
A03p03250 Brassica napus
A03p47290 Brassica napus
A03p47350 Brassica napus
A03p47420 Brassica napus
A10p29160 Brassica napus
A10p29170 Brassica napus
Aa31LG3G18960 Aethionema arabicum
Actinidia01025 Actinidia chinensis
Ah.15g095580 Amaranthus hybridus
Ah.16g106870 Amaranthus hybridus
AL6G17710 Arabidopsis lyrata
AL6G17720 Arabidopsis lyrata
AL6G17730 Arabidopsis lyrata
AL8G38400 Arabidopsis lyrata
Aqoxy7G00980 Aquilegia oxysepala
Aqoxy7G00981 Aquilegia oxysepala
Aqoxy7G00982 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.QD1YE4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SRYK9K Arachis hypogaea
AT1G69940 Arabidopsis thaliana
AT5G07410 Arabidopsis thaliana
AT5G07420 Arabidopsis thaliana
AT5G07430 Arabidopsis thaliana
AT5G61680 Arabidopsis thaliana
ATR0681G211 Amborella trichopoda
ATR0681G255 Amborella trichopoda
ATR0681G376 Amborella trichopoda
Atru.chr10.900 Acer truncatum
Atru.chr10.901 Acer truncatum
Atru.chr9.1681 Acer truncatum
Atru.chr9.1715 Acer truncatum
AUR62035937 Chenopodium quinoa
AUR62035938 Chenopodium quinoa
AUR62037620 Chenopodium quinoa
AUR62041500 Chenopodium quinoa
AUR62042415 Chenopodium quinoa
BcaB01g05691 Brassica carinata
BcaB01g06038 Brassica carinata
BcaC03g13190 Brassica carinata
BcaC06g32439 Brassica carinata
BcaC06g32440 Brassica carinata
BcaC06g32441 Brassica carinata
BcaC06g33137 Brassica carinata
BcaC06g33255 Brassica carinata
BolC1t03506H Brassica oleracea
BolC2t06273H Brassica oleracea
BolC2t06274H Brassica oleracea
BolC3t12906H Brassica oleracea
BolC7t45062H Brassica oleracea
BolC9t59698H Brassica oleracea
BolC9t59699H Brassica oleracea
BraA01t02911Z Brassica rapa
BraA02t04917Z Brassica rapa
BraA02t04918Z Brassica rapa
BraA03t09677Z Brassica rapa
BraA03t13856Z Brassica rapa
BraA10t44964Z Brassica rapa
C02p03110 Brassica napus
C02p03120 Brassica napus
C03p03680 Brassica napus
C09p69540 Brassica napus
C09p69550 Brassica napus
C09p69560 Brassica napus
CAN.G503.21 Capsicum annuum
CAN.G503.22 Capsicum annuum
CANSAT11G0138 Cannabis sativa
CANSAT11G1737 Cannabis sativa
CANSAT21G0861 Cannabis sativa
CANSAT21G2371 Cannabis sativa
CANSAT56G0335 Cannabis sativa
CANSAT56G1145 Cannabis sativa
CANSAT56G1566 Cannabis sativa
CANSAT56G2506 Cannabis sativa
CANSAT56G2960 Cannabis sativa
CANSAT56G3759 Cannabis sativa
CANSAT56G4353 Cannabis sativa
CARHR205720 Cardamine hirsuta
CARHR205730 Cardamine hirsuta
CARHR205740 Cardamine hirsuta
CARHR275480 Cardamine hirsuta
Carub.0006s0638 Capsella rubella
Carub.0006s0639 Capsella rubella
Carub.0006s0640 Capsella rubella
Carub.0008s2238 Capsella rubella
Ca_26032_v3 Cicer arietinum L.
Cc00_g13090 Coffea canephora
Cc00_g33030 Coffea canephora
Cc02_g04910 Coffea canephora
CDE02G3872 Ceratophyllum demersum
CDE06G2122 Ceratophyllum demersum
Cfa002942 Carpinus fangiana
Cfa002943 Carpinus fangiana
Cfa013612 Carpinus fangiana
Ciclev10010655m.g Citrus clementina
Ciclev10031872m.g Citrus clementina
CiPaw.04G139700 Carya illinoinensis
CiPaw.04G139800 Carya illinoinensis
CiPaw.04G139900 Carya illinoinensis
CiPaw.07G182500 Carya illinoinensis
ClCG00G005700 Citrullus lanatus
ClCG02G022610 Citrullus lanatus
ClCG02G022630 Citrullus lanatus
ClCG03G014780 Citrullus lanatus
ClCG11G011380 Citrullus lanatus
COL.COLO4_03994 Corchorus olitorius
COL.COLO4_21213 Corchorus olitorius
COL.COLO4_23434 Corchorus olitorius
COL.COLO4_37300 Corchorus olitorius
Cpa.g.sc3.25 Carica papaya
Cpa.g.sc3.26 Carica papaya
Cpa.g.sc3.28 Carica papaya
Cpa.g.sc82.68 Carica papaya
Cpa.g.sc82.70 Carica papaya
CsaV3_1G041370 Cucumis sativus L.
CsaV3_6G038740 Cucumis sativus L.
CsaV3_6G038750 Cucumis sativus L.
CSS0036475 Camellia sinensis var. sinensis
DCAR_002685 Daucus carota
DCAR_023862 Daucus carota
Dinv21884 Davidia involucrata
Dinv21885 Davidia involucrata
Dinv21886 Davidia involucrata
Dinv21887 Davidia involucrata
Dinv34524 Davidia involucrata
Duzib084G1385 Durio zibethinus
Duzib150G0775 Durio zibethinus
Duzib168G1522 Durio zibethinus
Duzib205G0372 Durio zibethinus
Duzib235G0224 Durio zibethinus
Duzib235G0249 Durio zibethinus
Duzib235G0286 Durio zibethinus
Duzib235G0412 Durio zibethinus
Duzib235G0535 Durio zibethinus
Duzib235G0643 Durio zibethinus
Duzib235G0912 Durio zibethinus
Duzib235G1482 Durio zibethinus
ECA233G0401 Erigeron canadensis
EL10Ac2g03359 Beta vulgaris
EL10Ac2g03370 Beta vulgaris
EL10Ac2g03373 Beta vulgaris
EL10Ac2g03374 Beta vulgaris
Eucgr.K00113 Eucalyptus grandis
FAN01G2471 Fragaria x ananassa
FAN03G1374 Fragaria x ananassa
FAN04G2297 Fragaria x ananassa
FAN06G0730 Fragaria x ananassa
FAN10G1572 Fragaria x ananassa
FAN19G0209 Fragaria x ananassa
FAN19G0373 Fragaria x ananassa
FAN23G0876 Fragaria x ananassa
FAN23G1019 Fragaria x ananassa
FAN28G0279 Fragaria x ananassa
FAN28G1352 Fragaria x ananassa
FAN28G1599 Fragaria x ananassa
FAN28G1895 Fragaria x ananassa
FAN28G2357 Fragaria x ananassa
FvH4_1g09290 Fragaria vesca
FvH4_1g11590 Fragaria vesca
FvH4_7g26440 Fragaria vesca
Glyma.01G066000 Glycine max
Glyma.01G066100 Glycine max
Glyma.01G066300 Glycine max
Glyma.01G068100 Glycine max
Glyma.02G124800 Glycine max
Glyma.13G113700 Glycine max
Gohir.1Z049342 Gossypium hirsutum
Gohir.1Z049442 Gossypium hirsutum
Gohir.A03G061400 Gossypium hirsutum
Gohir.A03G061500 Gossypium hirsutum
Gohir.A07G041200 Gossypium hirsutum
Gohir.A12G195433 Gossypium hirsutum
Gohir.A12G195466 Gossypium hirsutum
Gohir.A12G195500 Gossypium hirsutum
Gohir.D03G104500 Gossypium hirsutum
Gohir.D03G104633 Gossypium hirsutum
Gohir.D07G045333 Gossypium hirsutum
Gohir.D12G197850 Gossypium hirsutum
Gohir.D12G197900 Gossypium hirsutum
Gohir.D12G197966 Gossypium hirsutum
Gohir.D12G198032 Gossypium hirsutum
Gohir.D12G198100 Gossypium hirsutum
Gohir.D12G198200 Gossypium hirsutum
Gohir.D12G198233 Gossypium hirsutum
Gohir.D12G198266 Gossypium hirsutum
Gohir.D12G198300 Gossypium hirsutum
Gorai.003G110300 Gossypium raimondii
Gorai.003G110500 Gossypium raimondii
Gorai.008G212400 Gossypium raimondii
Gorai.008G212500 Gossypium raimondii
Gorai.008G212600 Gossypium raimondii
Gorai.008G212700 Gossypium raimondii
Gorai.008G212800 Gossypium raimondii
Gorai.008G212900 Gossypium raimondii
Gorai.008G213000 Gossypium raimondii
Gorai.N023200 Gossypium raimondii
GSVIVG01013827001 Vitis vinifera
GSVIVG01013832001 Vitis vinifera
GSVIVG01013838001 Vitis vinifera
GSVIVG01013839001 Vitis vinifera
GSVIVG01015022001 Vitis vinifera
HanXRQChr11g0324741 Helianthus annuus
Haze_22235 Corylus avellana
Haze_22236 Corylus avellana
Haze_22239 Corylus avellana
Haze_26063 Corylus avellana
Hma1.2p1_0502F.1_g167980 Hydrangea macrophylla
HPP92_016224 Vanilla planifolia
HPP92_016241 Vanilla planifolia
HPP92_016242 Vanilla planifolia
Lalb_Chr04g0255181 Lupinus albus
Lalb_Chr04g0255191 Lupinus albus
Lalb_Chr04g0255201 Lupinus albus
Lalb_Chr04g0255211 Lupinus albus
Lalb_Chr04g0255221 Lupinus albus
Lalb_Chr04g0255231 Lupinus albus
Lalb_Chr10g0099491 Lupinus albus
Lalb_Chr17g0341731 Lupinus albus
Lj2A207T58 Lonicera japonica
Lj6g0001683 Lotus japonicus
Lj6g0015894 Lotus japonicus
Lj8A50G56 Lonicera japonica
Lj8C50G7 Lonicera japonica
Lsat_1_v5_gn_8_11581 Lactuca sativa
Manes.01G075200 Manihot esculenta
Manes.01G075300 Manihot esculenta
Manes.01G075400 Manihot esculenta
Manes.01G075500 Manihot esculenta
Manes.01G075600 Manihot esculenta
Manes.02G212100 Manihot esculenta
Manes.02G213062 Manihot esculenta
Manes.02G217912 Manihot esculenta
Manes.02G217924 Manihot esculenta
Manes.02G217936 Manihot esculenta
Manes.02G217948 Manihot esculenta
Manes.02G217960 Manihot esculenta
Manes.02G217972 Manihot esculenta
Manes.02G217984 Manihot esculenta
Manes.04G060900 Manihot esculenta
Manes.05G193900 Manihot esculenta
Manes.06G032100 Manihot esculenta
Manes.06G129250 Manihot esculenta
Manes.06G129300 Manihot esculenta
Manes.06G129350 Manihot esculenta
Manes.07G060100 Manihot esculenta
Manes.14G013110 Manihot esculenta
Manes.14G013115 Manihot esculenta
Manes.14G013120 Manihot esculenta
Manes.14G027460 Manihot esculenta
Manes.14G041550 Manihot esculenta
Manes.14G041600 Manihot esculenta
Manes.14G041700 Manihot esculenta
Manes.14G041800 Manihot esculenta
Manes.14G041900 Manihot esculenta
MBI19_g37998_MAGBIO Magnolia biondii
MD01G1173100 Malus domestica
MD01G1173200 Malus domestica
MD02G1100100 Malus domestica
MD07G1239900 Malus domestica
Medtr0009s0340 Medicago truncatula
Medtr0009s0350 Medicago truncatula
Medtr2g073390 Medicago truncatula
Medtr4g074290 Medicago truncatula
Medtr4g124740 Medicago truncatula
MELO3C014536.2 Cucumis melo
MELO3C015550.2 Cucumis melo
MELO3C031057.2 Cucumis melo
Migut.F00546 Erythranthe guttata
MSTRG.27237 Avicennia marina
MSTRG.8855 Avicennia marina
Nitab4.5_0000375g0340 Nicotiana tabacum
Nitab4.5_0002236g0090 Nicotiana tabacum
Nn3g21376 Nelumbo nucifera
Nn3g21377 Nelumbo nucifera
Nn3g21708 Nelumbo nucifera
Nn8g38540 Nelumbo nucifera
Oeu001363.1 Olea europaea
Oeu023793.1 Olea europaea
Peaxi162Scf00167g01016 Petunia axillaris
Peaxi162Scf00167g01017 Petunia axillaris
PGR142G1425 Punica granatum
PGSC0003DMG400011648 Solanum tuberosum
PGSC0003DMG400011660 Solanum tuberosum
Phvul.003G027000 Phaseolus vulgaris
Phvul.003G127700 Phaseolus vulgaris
Potri.006G137100 Populus trichocarpa
Potri.006G186000 Populus trichocarpa
Potri.006G186100 Populus trichocarpa
Potri.012G112800 Populus trichocarpa
Potri.012G113433 Populus trichocarpa
Potri.012G113533 Populus trichocarpa
Potri.012G114266 Populus trichocarpa
Potri.012G114900 Populus trichocarpa
Potri.015G110700 Populus trichocarpa
Prupe.1G537900 Prunus persica
Prupe.1G538100 Prunus persica
Prupe.2G268200 Prunus persica
Prupe.2G268300 Prunus persica
Prupe.2G268400 Prunus persica
Prupe.2G268500 Prunus persica
Prupe.3G147000 Prunus persica
Prupe.3G149100 Prunus persica
Prupe.6G128000 Prunus persica
Prupe.6G128100 Prunus persica
Prupe.6G128200 Prunus persica
Prupe.6G128300 Prunus persica
Prupe.7G011200 Prunus persica
Prupe.7G192800 Prunus persica
Prupe.I005000 Prunus persica
Prupe.I005200 Prunus persica
Psat0s2373g0080 Pisum sativum
PSO223G0016 Papaver somniferum
PSO223G0028 Papaver somniferum
PSO223G0074 Papaver somniferum
PSO339G1130 Papaver somniferum
PSO386G0070 Papaver somniferum
PSO386G0204 Papaver somniferum
PSO386G0274 Papaver somniferum
QL09p026785 Quercus lobata
RcHm_v2.0_Chr1g0373011 Rosa chinensis
RcHm_v2.0_Chr1g0373031 Rosa chinensis
RcHm_v2.0_Chr2g0095851 Rosa chinensis
Rhsim09G0188100 Rhododendron simsii
Sabra04G0067700 Salix brachista
Sabra06G0107200 Salix brachista
Sabra12G0082400 Salix brachista
SalBow3G0540 Salvia bowleyana
SalBow3G1396 Salvia bowleyana
Sc06g0010780 Simmondsia chinensis
Sc23g0004960 Simmondsia chinensis
Sc23g0004980 Simmondsia chinensis
Sed0004570 Sechium edule
Sed0005267 Sechium edule
Sed0007539 Sechium edule
Sed0015587 Sechium edule
Sed0021812 Sechium edule
Sed0022128 Sechium edule
Sed0024239 Sechium edule
Sed0025138 Sechium edule
SGA_v2.0_scaffold44G16603 Striga asiatica
Solyc05g052110.3 Solanum lycopersicum
Solyc05g052120.4 Solanum lycopersicum
Sopen05g030650 Solanum pennellii
Sopen05g030660 Solanum pennellii
Sp2g24890 Schrenkiella parvula
Sp6g35440 Schrenkiella parvula
Sp6g35450 Schrenkiella parvula
Sp6g35460 Schrenkiella parvula
TAR383G0252 Trochodendron aralioides
TAR624G1218 Trochodendron aralioides
THA.LOC104801685 Tarenaya hassleriana
THA.LOC104801695 Tarenaya hassleriana
THA.LOC104818292 Tarenaya hassleriana
THA.LOC104818510 Tarenaya hassleriana
Thecc.03G144600 Theobroma cacao
Thhalv10004453m.g Eutrema salsugineum
Thhalv10013901m.g Eutrema salsugineum
Thhalv10013913m.g Eutrema salsugineum
TPR.G12714 Trifolium pratense
TPR.G20011 Trifolium pratense
TWI23G0825 Tripterygium wilfordii
TWI39G1148 Tripterygium wilfordii
TWI74G1616 Tripterygium wilfordii
unitig_37.g12482 Utricularia gibba
unitig_52.g17775 Utricularia gibba
vmacro09934 Vaccinium macrocarpon
VMungo1215G0138 Vigna mungo
VMungo1215G0708 Vigna mungo

User provided reference genes

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