Gene: Sopen05g030660

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g030660
  • Transcript Identifier Sopen05g030660.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 74328114-74332185 : positive

Gene Family Information

  • ID HOM05D000165
  • #Genes/#Species 2272/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g030660.1

Descriptions

  • Description Encodes a protein with pectin methylesterase activity. The protein expression was shown to be highly restricted to the pollen grain , Pectinesterase, catalytic , Pectin lyase fold | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042545
IEA
InterProcell wall modification
GO:0009860
ISO
PLAZA Integrative Orthologypollen tube growth AT1G69940
GO:0050829
ISO
PLAZA Integrative Orthologydefense response to Gram-negative bacterium AT1G69940
GO:0009846
ISO
PLAZA Integrative Orthologypollen germination AT5G07410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030599
IEA
InterPropectinesterase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G69940

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT1G69940
GO:0090406
ISO
PLAZA Integrative Orthologypollen tube AT5G07410

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000070 Pectinesterase, catalytic
IPR011050 Pectin lyase fold/virulence factor
IPR012334 Pectin lyase fold
Mapman id Description
21.3.1.2.1 Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase