Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p10750 Brassica napus
A02p29340 Brassica napus
A03p51500 Brassica napus
A04p02410 Brassica napus
A06p46390 Brassica napus
A09p21930 Brassica napus
A09p51230 Brassica napus
Aa31LG10G13310 Aethionema arabicum
Aa31LG9G7300 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2557 Anthoceros agrestis
Actinidia10948 Actinidia chinensis
Actinidia11164 Actinidia chinensis
Actinidia39517 Actinidia chinensis
Ah.01g004920 Amaranthus hybridus
Ah.01g015890 Amaranthus hybridus
Ah.16g102410 Amaranthus hybridus
AL4G41320 Arabidopsis lyrata
AL5G40470 Arabidopsis lyrata
AL8G12820 Arabidopsis lyrata
Aqoxy1G02003 Aquilegia oxysepala
Aqoxy1G02006 Aquilegia oxysepala
Aqoxy3G02931 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8W4JGI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AR0VEL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B9T1G9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QQZY3Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QWSB5M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YL4K0N Arachis hypogaea
AT2G42740 Arabidopsis thaliana
AT3G58700 Arabidopsis thaliana
AT4G18730 Arabidopsis thaliana
AT5G45775 Arabidopsis thaliana
ATR0626G309 Amborella trichopoda
ATR0681G025 Amborella trichopoda
Atru.chr10.1590 Acer truncatum
Atru.chr6.2764 Acer truncatum
AUR62024048 Chenopodium quinoa
AUR62031787 Chenopodium quinoa
AUR62040437 Chenopodium quinoa
BcaB02g07511 Brassica carinata
BcaB02g08240 Brassica carinata
BcaB04g18495 Brassica carinata
BcaB06g27473 Brassica carinata
BcaB07g30431 Brassica carinata
BcaB07g30868 Brassica carinata
BcaB08g36632 Brassica carinata
BcaC02g10023 Brassica carinata
BcaC03g16786 Brassica carinata
BcaC04g21744 Brassica carinata
BcaC06g31518 Brassica carinata
BcaC06g34406 Brassica carinata
BcaC07g40218 Brassica carinata
BcaC07g40287 Brassica carinata
BcaC09g51470 Brassica carinata
BcaNung02671 Brassica carinata
BcaNung05919 Brassica carinata
BolC1t01248H Brassica oleracea
BolC2t10712H Brassica oleracea
BolC4t24948H Brassica oleracea
BolC6t37729H Brassica oleracea
BolC7t43442H Brassica oleracea
BolC7t45498H Brassica oleracea
BolC8t51001H Brassica oleracea
BolC9t55680H Brassica oleracea
BraA01t01021Z Brassica rapa
BraA02t07964Z Brassica rapa
BraA03t14233Z Brassica rapa
BraA04t15971Z Brassica rapa
BraA06t27503Z Brassica rapa
BraA09t37796Z Brassica rapa
BraA09t40566Z Brassica rapa
C01p12710 Brassica napus
C02p46600 Brassica napus
C04p33810 Brassica napus
C06p25660 Brassica napus
C07p29030 Brassica napus
C07p49950 Brassica napus
C08p34020 Brassica napus
C09p28100 Brassica napus
CAN.G1148.3 Capsicum annuum
CAN.G1360.17 Capsicum annuum
CAN.G1716.5 Capsicum annuum
CAN.G625.41 Capsicum annuum
CANSAT64G1245 Cannabis sativa
CARHR169080 Cardamine hirsuta
CARHR176200 Cardamine hirsuta
CARHR225580 Cardamine hirsuta
Carub.0005s2549 Capsella rubella
Carub.0007s2251 Capsella rubella
Carub.0008s0221 Capsella rubella
Ca_03845_v3 Cicer arietinum L.
Ca_05014_v3 Cicer arietinum L.
Ca_14035_v3 Cicer arietinum L.
Ca_24170_v3 Cicer arietinum L.
CBR_g55230 Chara braunii
Cc05_g08530 Coffea canephora
CDE04G0826 Ceratophyllum demersum
CDE10G0223 Ceratophyllum demersum
CDE10G0560 Ceratophyllum demersum
CDE10G0585 Ceratophyllum demersum
CDE10G0866 Ceratophyllum demersum
CDE10G1125 Ceratophyllum demersum
Cfa023575 Carpinus fangiana
Cfa027004 Carpinus fangiana
Ciclev10016873m.g Citrus clementina
Ciclev10016875m.g Citrus clementina
CiPaw.03G192700 Carya illinoinensis
CiPaw.09G071700 Carya illinoinensis
ClCG01G023830 Citrullus lanatus
ClCG03G007540 Citrullus lanatus
ClCG07G002650 Citrullus lanatus
COL.COLO4_31259 Corchorus olitorius
COL.COLO4_33610 Corchorus olitorius
Cpa.g.sc52.157 Carica papaya
Cpa.g.sc7.103 Carica papaya
Cre01.g027000 Chlamydomonas reinhardtii
CsaV3_1G033190 Cucumis sativus L.
CsaV3_3G010250 Cucumis sativus L.
CsaV3_6G051000 Cucumis sativus L.
CSS0015183 Camellia sinensis var. sinensis
CSS0045621 Camellia sinensis var. sinensis
DCAR_009775 Daucus carota
DCAR_013278 Daucus carota
Dinv11959 Davidia involucrata
Dinv12765 Davidia involucrata
Dinv16528 Davidia involucrata
Dinv24841 Davidia involucrata
Duzib160G0289 Durio zibethinus
Duzib160G0469 Durio zibethinus
Duzib192G0814 Durio zibethinus
Duzib235G1546 Durio zibethinus
ECA234G3619 Erigeron canadensis
ECA236G0880 Erigeron canadensis
EL10Ac9g20984 Beta vulgaris
Eucgr.A01929 Eucalyptus grandis
Eucgr.D00478 Eucalyptus grandis
FAN02G3837 Fragaria x ananassa
FAN11G0047 Fragaria x ananassa
FAN14G2161 Fragaria x ananassa
FAN15G2967 Fragaria x ananassa
FAN16G0546 Fragaria x ananassa
FAN21G1492 Fragaria x ananassa
FAN24G2928 Fragaria x ananassa
FAN25G2804 Fragaria x ananassa
FAN27G3140 Fragaria x ananassa
FvH4_2g20140 Fragaria vesca
FvH4_3g07450 Fragaria vesca
FvH4_6g27670 Fragaria vesca
Glyma.04G111500 Glycine max
Glyma.04G130200 Glycine max
Glyma.06G272500 Glycine max
Glyma.06G274200 Glycine max
Glyma.06G317400 Glycine max
Glyma.06G323000 Glycine max
Glyma.12G131600 Glycine max
Glyma.12G131700 Glycine max
Glyma.15G227600 Glycine max
Gohir.A05G154100 Gossypium hirsutum
Gohir.A06G132300 Gossypium hirsutum
Gohir.A06G199700 Gossypium hirsutum
Gohir.A09G074800 Gossypium hirsutum
Gohir.A10G035600 Gossypium hirsutum
Gohir.D05G156900 Gossypium hirsutum
Gohir.D06G137800 Gossypium hirsutum
Gohir.D06G207000 Gossypium hirsutum
Gohir.D09G074600 Gossypium hirsutum
Gohir.D10G036300 Gossypium hirsutum
Gorai.006G089700 Gossypium raimondii
Gorai.009G161300 Gossypium raimondii
Gorai.010G160100 Gossypium raimondii
Gorai.010G241400 Gossypium raimondii
Gorai.011G038200 Gossypium raimondii
GSVIVG01015626001 Vitis vinifera
GSVIVG01020743001 Vitis vinifera
GSVIVG01021244001 Vitis vinifera
HanXRQChr03g0067641 Helianthus annuus
HanXRQChr04g0115801 Helianthus annuus
HanXRQChr10g0295381 Helianthus annuus
HanXRQChr10g0299731 Helianthus annuus
HanXRQChr15g0480771 Helianthus annuus
HanXRQChr15g0488111 Helianthus annuus
HanXRQChr16g0519101 Helianthus annuus
Haze_06193 Corylus avellana
Haze_13427 Corylus avellana
Haze_26422 Corylus avellana
Hma1.2p1_1948F.1_g308700 Hydrangea macrophylla
HPP92_015921 Vanilla planifolia
HPP92_015934 Vanilla planifolia
Hund00862 Selenicereus undatus
Hund23910 Selenicereus undatus
Lalb_Chr01g0007711 Lupinus albus
Lalb_Chr01g0007721 Lupinus albus
Lalb_Chr03g0032291 Lupinus albus
Lalb_Chr15g0086231 Lupinus albus
Lalb_Chr18g0054671 Lupinus albus
Lalb_Chr19g0132451 Lupinus albus
Lalb_Chr20g0117531 Lupinus albus
Lalb_Chr21g0316411 Lupinus albus
Lj1A1174T74 Lonicera japonica
Lj1A677T62 Lonicera japonica
Lj1g0013201 Lotus japonicus
Lj3g0011344 Lotus japonicus
Lj3g0012622 Lotus japonicus
Lj6P493T14 Lonicera japonica
Lj8C100G12 Lonicera japonica
LjContig00564g0005203 Lotus japonicus
Lsat_1_v5_gn_4_48420 Lactuca sativa
Lsat_1_v5_gn_4_69561 Lactuca sativa
Lsat_1_v5_gn_7_24281 Lactuca sativa
Manes.01G262150 Manihot esculenta
Manes.11G090478 Manihot esculenta
Manes.14G000733 Manihot esculenta
Manes.16G041800 Manihot esculenta
Manes.17G058100 Manihot esculenta
Mapoly0038s0097 Marchantia polymorpha
Mapoly0207s0012 Marchantia polymorpha
MBI02_g05659_MAGBIO Magnolia biondii
MBI07_g09548_MAGBIO Magnolia biondii
MBI15_g23975_MAGBIO Magnolia biondii
MBI15_g30387_MAGBIO Magnolia biondii
MBI17_g29611_MAGBIO Magnolia biondii
MBI17_g41982_MAGBIO Magnolia biondii
MCO01G342 Micromonas commoda
MD05G1297100 Malus domestica
MD09G1235900 Malus domestica
MD10G1276900 Malus domestica
MD17G1264500 Malus domestica
Medtr3g007690 Medicago truncatula
Medtr3g007700 Medicago truncatula
Medtr4g080740 Medicago truncatula
Medtr8g046140 Medicago truncatula
MELO3C002668.2 Cucumis melo
MELO3C006245.2 Cucumis melo
MELO3C007204.2 Cucumis melo
MELO3C033353.2 Cucumis melo
Migut.A00269 Erythranthe guttata
Migut.E01504 Erythranthe guttata
Migut.M00275 Erythranthe guttata
MSTRG.11737 Avicennia marina
MSTRG.14004 Avicennia marina
MSTRG.15084 Avicennia marina
MSTRG.25878 Avicennia marina
MSTRG.6782 Avicennia marina
Nitab4.5_0000249g0140 Nicotiana tabacum
Nitab4.5_0000537g0150 Nicotiana tabacum
Nitab4.5_0000753g0100 Nicotiana tabacum
Nitab4.5_0003652g0040 Nicotiana tabacum
Nitab4.5_0004937g0090 Nicotiana tabacum
Nitab4.5_0005909g0030 Nicotiana tabacum
Nitab4.5_0007923g0020 Nicotiana tabacum
Nitab4.5_0008960g0010 Nicotiana tabacum
Nn1g04500 Nelumbo nucifera
Nn2g11267 Nelumbo nucifera
Nn3g17927 Nelumbo nucifera
Nn3g20441 Nelumbo nucifera
Nn3g21125 Nelumbo nucifera
Nn5g26753 Nelumbo nucifera
Nn5g27703 Nelumbo nucifera
Nn8g40396 Nelumbo nucifera
Oeu005594.1 Olea europaea
Oeu019015.1 Olea europaea
Os01g0205500 Oryza sativa ssp. japonica
Os02g0235600 Oryza sativa ssp. japonica
Os05g0207300 Oryza sativa ssp. japonica
Os06g0550000 Oryza sativa ssp. japonica
Peaxi162Scf00229g01114 Petunia axillaris
Peaxi162Scf00384g00127 Petunia axillaris
Peaxi162Scf00469g00530 Petunia axillaris
Peaxi162Scf00664g00003 Petunia axillaris
PGR042G1504 Punica granatum
PGR142G3242 Punica granatum
PGSC0003DMG400007855 Solanum tuberosum
PGSC0003DMG400020434 Solanum tuberosum
PGSC0003DMG400026398 Solanum tuberosum
PGSC0003DMG402010558 Solanum tuberosum
Phvul.005G011400 Phaseolus vulgaris
Phvul.011G126600 Phaseolus vulgaris
Phvul.011G182132 Phaseolus vulgaris
Potri.002G109701 Populus trichocarpa
Potri.006G181501 Populus trichocarpa
Potri.006G181600 Populus trichocarpa
Potri.011G068900 Populus trichocarpa
Potri.011G069200 Populus trichocarpa
Pp3c11_8070 Physcomitrium patens
Pp3c1_7710 Physcomitrium patens
Pp3c23_18680 Physcomitrium patens
Pp3c27_2260 Physcomitrium patens
Pp3c2_33280 Physcomitrium patens
Pp3c3_23540 Physcomitrium patens
Pp3c3_23620 Physcomitrium patens
Pp3c4_31960 Physcomitrium patens
Pp3c5_3870 Physcomitrium patens
Pp3c7_20160 Physcomitrium patens
PRCOL_00006126 Prasinoderma coloniale
Prupe.3G113800 Prunus persica
Prupe.4G065200 Prunus persica
Psat5g229920 Pisum sativum
Psat5g230040 Pisum sativum
Psat7g162240 Pisum sativum
PSO063G5928 Papaver somniferum
PSO541G3479 Papaver somniferum
PSO675G1047 Papaver somniferum
PSO782G4647 Papaver somniferum
PSO832G0339 Papaver somniferum
QL05p048349 Quercus lobata
QL08p042282 Quercus lobata
RcHm_v2.0_Chr2g0130711 Rosa chinensis
RcHm_v2.0_Chr4g0400401 Rosa chinensis
RcHm_v2.0_Chr5g0010121 Rosa chinensis
RcHm_v2.0_Chr5g0011401 Rosa chinensis
RcHm_v2.0_Chr6g0269691 Rosa chinensis
RcHm_v2.0_Chr6g0300201 Rosa chinensis
Rhsim02G0145200 Rhododendron simsii
Rhsim04G0075900 Rhododendron simsii
Rhsim06G0129900 Rhododendron simsii
Sabra06G0138300 Salix brachista
Sabra06G0138400 Salix brachista
Sabra11G0004800 Salix brachista
Sabra11G0005200 Salix brachista
Sabra11G0049900 Salix brachista
Sabra11G0050000 Salix brachista
Sabra11G0050100 Salix brachista
Sabra11G0050200 Salix brachista
Sabra11G0050400 Salix brachista
Sabra11G0051900 Salix brachista
Sabra11G0052100 Salix brachista
Sabra11G0052700 Salix brachista
Sabra11G0053500 Salix brachista
Sabra11G0057000 Salix brachista
SalBow4G3345 Salvia bowleyana
SalBow7G1038 Salvia bowleyana
Sc06g0009000 Simmondsia chinensis
Sc06g0009020 Simmondsia chinensis
Sc12g0003650 Simmondsia chinensis
Sc21g0004090 Simmondsia chinensis
Sed0000237 Sechium edule
Sed0001714 Sechium edule
Sed0004754 Sechium edule
Sed0025716 Sechium edule
SGA_v2.0_scaffold163G38093 Striga asiatica
SGA_v2.0_scaffold169G38635 Striga asiatica
SGA_v2.0_scaffold27G11499 Striga asiatica
SGA_v2.0_scaffold280G46843 Striga asiatica
SGA_v2.0_scaffold64G22094 Striga asiatica
SHI21769 Sapria himalayana
SMO196G0017 Selaginella moellendorffii
Solyc02g086240.3 Solanum lycopersicum
Solyc04g080150.3 Solanum lycopersicum
Solyc07g055230.4 Solanum lycopersicum
Solyc10g007980.3 Solanum lycopersicum
Solyc12g010930.2 Solanum lycopersicum
Sopen02g030920 Solanum pennellii
Sopen07g026990 Solanum pennellii
Sopen10g003850 Solanum pennellii
Sopen11g008470 Solanum pennellii
Sopen12g006290 Solanum pennellii
Sp2g10690 Schrenkiella parvula
Sp5g04150 Schrenkiella parvula
Sp7g17430 Schrenkiella parvula
TAR622G1161 Trochodendron aralioides
TAR624G0369 Trochodendron aralioides
TAR627G0718 Trochodendron aralioides
TAR629G0405 Trochodendron aralioides
THA.LOC104798433 Tarenaya hassleriana
THA.LOC104803021 Tarenaya hassleriana
THA.LOC104806164 Tarenaya hassleriana
THA.LOC104812879 Tarenaya hassleriana
Thecc.01G153400 Theobroma cacao
Thecc.06G167400 Theobroma cacao
Thhalv10001041m.g Eutrema salsugineum
Thhalv10006260m.g Eutrema salsugineum
Thhalv10022936m.g Eutrema salsugineum
Thhalv10026344m.g Eutrema salsugineum
TPR.G12255 Trifolium pratense
TPR.G25969 Trifolium pratense
TPR.G28347 Trifolium pratense
TPR.G30074 Trifolium pratense
TPR.G30265 Trifolium pratense
TWI09G0111 Tripterygium wilfordii
TWI23G0133 Tripterygium wilfordii
TWI53G1878 Tripterygium wilfordii
TWI59G0955 Tripterygium wilfordii
TWI73G0319 Tripterygium wilfordii
unitig_32.g10924 Utricularia gibba
unitig_578.g16598 Utricularia gibba
unitig_748.g7500 Utricularia gibba
unitig_85.g27158 Utricularia gibba
vmacro12386 Vaccinium macrocarpon
vmacro16048 Vaccinium macrocarpon
VMungo1127G1016 Vigna mungo
VMungo1127G1818 Vigna mungo
Zm00001eb120820 Zea mays
Zm00001eb204910 Zea mays
Zm00001eb238930 Zea mays
Zm00001eb347380 Zea mays
Zm00001eb384890 Zea mays

User provided reference genes

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