Gene: AT5G45775

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G45775
  • Transcript Identifier AT5G45775.2
  • Gene Type Coding gene
  • Location Chr5 : 18565281-18566496 : negative

Gene Family Information

  • ID HOM05D001556
  • #Genes/#Species 410/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G45775.2

Descriptions

  • Description Ribosomal L5P family protein
  • Computational description Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, vacuole; EXPRESSED IN: male gametophyte, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, C-terminal (InterPro:IPR020928), Ribosomal protein L5, N-terminal (InterPro:IPR020927); BEST Arabidopsis thaliana protein match is: ribosomal protein L16B (TAIR:AT4G18730.1); Has 7630 Blast hits to 7630 proteins in 2736 species: Archae - 313; Bacteria - 4930; Metazoa - 255; Fungi - 164; Plants - 275; Viruses - 0; Other Eukaryotes - 1693 (source: NCBI BLink).
  • Computational description Ribosomal L5P family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, vacuole; EXPRESSED IN: male gametophyte, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132), Ribosomal protein L5, conserved site (InterPro:IPR020929), Ribosomal protein L5, N-terminal (InterPro:IPR020927), Ribosomal protein L5, C-terminal (InterPro:IPR020928); BEST Arabidopsis thaliana protein match is: ribosomal protein L16B (TAIR:AT4G18730.1); Has 7854 Blast hits to 7854 proteins in 2814 species: Archae - 312; Bacteria - 5083; Metazoa - 254; Fungi - 163; Plants - 278; Viruses - 0; Other Eukaryotes - 1764 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA
Gene OntologymRNA binding1
GO:0003735
IEA
InterProstructural constituent of ribosome

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005773
HDA
Gene Ontologyvacuole2
GO:0005829
RCA
Gene Ontologycytosol3
GO:0005794
RCA
Gene OntologyGolgi apparatus4
GO:0009536
HDA
Gene Ontologyplastid5
GO:0005840
IEA
InterProribosome
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT4G18730
GO:0022625
ISO
PLAZA Integrative Orthologycytosolic large ribosomal subunit AT4G18730

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022803 Ribosomal protein L5 domain superfamily
IPR031310 Ribosomal protein L5, N-terminal
IPR002132 Ribosomal protein L5
IPR031309 Ribosomal protein L5, C-terminal
Mapman id Description
17.1.2.1.11 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL11