Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p44140 Brassica napus
A06p39080 Brassica napus
Aa31sc18G140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3862 Anthoceros agrestis
Actinidia09454 Actinidia chinensis
Actinidia10211 Actinidia chinensis
Actinidia23376 Actinidia chinensis
Actinidia23776 Actinidia chinensis
Actinidia23777 Actinidia chinensis
Ah.04g150650 Amaranthus hybridus
Ah.08g218900 Amaranthus hybridus
Ah.11g039360 Amaranthus hybridus
Ah.13g077790 Amaranthus hybridus
AL2G17760 Arabidopsis lyrata
AL3G41150 Arabidopsis lyrata
AL8G19050 Arabidopsis lyrata
AL8G21550 Arabidopsis lyrata
Aqoxy4G00034 Aquilegia oxysepala
Aqoxy5G00042 Aquilegia oxysepala
Aqoxy6G02543 Aquilegia oxysepala
Aqoxy7G03853 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3F3WIY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3FW66N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8X4Q28 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.90AC01 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DU5DWV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E1KG5K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LNXF08 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P8MRPL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S3X144 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TFY45J Arachis hypogaea
AT1G58450 Arabidopsis thaliana
AT3G25230 Arabidopsis thaliana
AT5G48570 Arabidopsis thaliana
ATR0739G132 Amborella trichopoda
ATR1147G036 Amborella trichopoda
Atru.chr1.1310 Acer truncatum
Atru.chr13.854 Acer truncatum
Atru.chr4.824 Acer truncatum
Atru.chr6.1453 Acer truncatum
AUR62001164 Chenopodium quinoa
AUR62002149 Chenopodium quinoa
AUR62018396 Chenopodium quinoa
AUR62022158 Chenopodium quinoa
AUR62030262 Chenopodium quinoa
BcaB08g34446 Brassica carinata
BcaB08g34451 Brassica carinata
BcaC01g03234 Brassica carinata
BcaC06g30780 Brassica carinata
BcaC06g30781 Brassica carinata
BolC3t17738H Brassica oleracea
BolC7t44446H Brassica oleracea
BraA03t13544Z Brassica rapa
BraA06t26822Z Brassica rapa
C03p54520 Brassica napus
C07p39260 Brassica napus
CAN.G1069.21 Capsicum annuum
CAN.G115.5 Capsicum annuum
CAN.G1444.1 Capsicum annuum
CAN.G1818.4 Capsicum annuum
CAN.G724.43 Capsicum annuum
CAN.G874.19 Capsicum annuum
CANSAT01G0614 Cannabis sativa
CANSAT78G1440 Cannabis sativa
CARHR101590 Cardamine hirsuta
CARHR183440 Cardamine hirsuta
Carub.0002s0606 Capsella rubella
Carub.0003s2563 Capsella rubella
Carub.0008s0820 Capsella rubella
Ca_07499_v3 Cicer arietinum L.
Ca_08706_v3 Cicer arietinum L.
Ca_18008_v3 Cicer arietinum L.
Ca_23206_v3 Cicer arietinum L.
CBR_g29656 Chara braunii
CBR_g29659 Chara braunii
Cc01_g16410 Coffea canephora
Cc03_g09080 Coffea canephora
Cc06_g20290 Coffea canephora
Cc06_g20300 Coffea canephora
Cc06_g20350 Coffea canephora
Cc10_g05120 Coffea canephora
CDE01G0210 Ceratophyllum demersum
CDE01G0720 Ceratophyllum demersum
CDE04G3404 Ceratophyllum demersum
Cfa008668 Carpinus fangiana
Cfa013756 Carpinus fangiana
Cfa021438 Carpinus fangiana
Ciclev10003372m.g Citrus clementina
Ciclev10011447m.g Citrus clementina
Ciclev10013213m.g Citrus clementina
Ciclev10031088m.g Citrus clementina
CiPaw.01G113200 Carya illinoinensis
CiPaw.08G051000 Carya illinoinensis
CiPaw.09G051100 Carya illinoinensis
CiPaw.13G051700 Carya illinoinensis
ClCG05G007100 Citrullus lanatus
ClCG09G008490 Citrullus lanatus
COL.COLO4_28478 Corchorus olitorius
COL.COLO4_33102 Corchorus olitorius
COL.COLO4_35962 Corchorus olitorius
Cpa.g.sc142.50 Carica papaya
Cpa.g.sc157.11 Carica papaya
Cpa.g.sc8.107 Carica papaya
Cre09.g398067 Chlamydomonas reinhardtii
CsaV3_3G015840 Cucumis sativus L.
CsaV3_7G026570 Cucumis sativus L.
CSS0007797 Camellia sinensis var. sinensis
CSS0012168 Camellia sinensis var. sinensis
CSS0031366 Camellia sinensis var. sinensis
CSS0033787 Camellia sinensis var. sinensis
CSS0046057 Camellia sinensis var. sinensis
DCAR_004749 Daucus carota
DCAR_009871 Daucus carota
DCAR_020600 Daucus carota
Dinv30283 Davidia involucrata
Dinv30670 Davidia involucrata
Dinv34330 Davidia involucrata
Dinv39212 Davidia involucrata
Duzib093G1896 Durio zibethinus
Duzib133G0343 Durio zibethinus
Duzib138G0528 Durio zibethinus
Duzib151G0019 Durio zibethinus
Duzib211G0643 Durio zibethinus
ECA236G1971 Erigeron canadensis
ECA236G2728 Erigeron canadensis
ECA247G3328 Erigeron canadensis
ECA248G1653 Erigeron canadensis
EL10Ac3g07286 Beta vulgaris
EL10Ac7g17958 Beta vulgaris
Eucgr.F02235 Eucalyptus grandis
Eucgr.H02629 Eucalyptus grandis
Eucgr.K01672 Eucalyptus grandis
Eucgr.K02110 Eucalyptus grandis
Eucgr.L02444 Eucalyptus grandis
FAN07G0161 Fragaria x ananassa
FAN12G3068 Fragaria x ananassa
FAN15G0871 Fragaria x ananassa
FAN15G3105 Fragaria x ananassa
FAN17G0261 Fragaria x ananassa
FAN22G0808 Fragaria x ananassa
FAN24G0761 Fragaria x ananassa
FAN24G2049 Fragaria x ananassa
FAN27G2593 Fragaria x ananassa
FAN27G3507 Fragaria x ananassa
FvH4_2g18150 Fragaria vesca
FvH4_2g32840 Fragaria vesca
FvH4_4g12830 Fragaria vesca
Glyma.03G086200 Glycine max
Glyma.03G122100 Glycine max
Glyma.05G149900 Glycine max
Glyma.07G161750 Glycine max
Glyma.08G106700 Glycine max
Glyma.08G346700 Glycine max
Glyma.14G089045 Glycine max
Glyma.16G088000 Glycine max
Glyma.17G233800 Glycine max
Glyma.18G158100 Glycine max
Glyma.19G126251 Glycine max
Gohir.A05G211100 Gossypium hirsutum
Gohir.A07G091400 Gossypium hirsutum
Gohir.A09G208100 Gossypium hirsutum
Gohir.A10G130600 Gossypium hirsutum
Gohir.A11G140700 Gossypium hirsutum
Gohir.D02G018350 Gossypium hirsutum
Gohir.D05G214400 Gossypium hirsutum
Gohir.D07G096100 Gossypium hirsutum
Gohir.D09G201600 Gossypium hirsutum
Gohir.D10G135800 Gossypium hirsutum
Gohir.D11G147200 Gossypium hirsutum
Gorai.001G103400 Gossypium raimondii
Gorai.005G022600 Gossypium raimondii
Gorai.006G225400 Gossypium raimondii
Gorai.007G157600 Gossypium raimondii
Gorai.009G221100 Gossypium raimondii
Gorai.011G150600 Gossypium raimondii
GSVIVG01002527001 Vitis vinifera
GSVIVG01002899001 Vitis vinifera
GSVIVG01009318001 Vitis vinifera
GSVIVG01025799001 Vitis vinifera
HanXRQChr04g0108381 Helianthus annuus
HanXRQChr08g0232301 Helianthus annuus
HanXRQChr11g0344551 Helianthus annuus
Haze_03331 Corylus avellana
Haze_11686 Corylus avellana
Haze_20274 Corylus avellana
Haze_22414 Corylus avellana
Hma1.2p1_0226F.1_g095160 Hydrangea macrophylla
Hma1.2p1_1170F.1_g263350 Hydrangea macrophylla
HPP92_003172 Vanilla planifolia
HPP92_025244 Vanilla planifolia
Hund05289 Selenicereus undatus
Hund05592 Selenicereus undatus
Hund18462 Selenicereus undatus
Hund19025 Selenicereus undatus
Lalb_Chr12g0205901 Lupinus albus
Lalb_Chr14g0365471 Lupinus albus
Lalb_Chr19g0125951 Lupinus albus
Lalb_Chr22g0355721 Lupinus albus
Lj1A92T27 Lonicera japonica
Lj1C1082G15 Lonicera japonica
Lj1C94T2 Lonicera japonica
Lj1g0019067 Lotus japonicus
Lj1g0026054 Lotus japonicus
Lj2A1121T86 Lonicera japonica
Lj3g0022519 Lotus japonicus
Lj4A73G44 Lonicera japonica
Lj4g0024760 Lotus japonicus
Lj5g0008051 Lotus japonicus
Lsat_1_v5_gn_1_19881 Lactuca sativa
Lsat_1_v5_gn_1_69221 Lactuca sativa
Lsat_1_v5_gn_2_116080 Lactuca sativa
Lsat_1_v5_gn_8_89001 Lactuca sativa
Lsat_1_v5_gn_9_17400 Lactuca sativa
Lsat_1_v5_gn_9_4960 Lactuca sativa
Lsat_1_v5_gn_9_76560 Lactuca sativa
Manes.05G198600 Manihot esculenta
Manes.08G063600 Manihot esculenta
Manes.12G050700 Manihot esculenta
Manes.13G051764 Manihot esculenta
Manes.18G047900 Manihot esculenta
Mapoly0001s0304 Marchantia polymorpha
MBI04_g22009_MAGBIO Magnolia biondii
MBI07_g06206_MAGBIO Magnolia biondii
MBI11_g07397_MAGBIO Magnolia biondii
MBI16_g37638_MAGBIO Magnolia biondii
MCO08G129 Micromonas commoda
MD04G1022400 Malus domestica
MD05G1166200 Malus domestica
MD10G1156300 Malus domestica
MD15G1067100 Malus domestica
Medtr1g017870 Medicago truncatula
Medtr7g053470 Medicago truncatula
Medtr8g008640 Medicago truncatula
Medtr8g010620 Medicago truncatula
Medtr8g011100 Medicago truncatula
Medtr8g011140 Medicago truncatula
Medtr8g012340 Medicago truncatula
Medtr8g012360 Medicago truncatula
Medtr8g038785 Medicago truncatula
Medtr8g080980 Medicago truncatula
MELO3C006783.2 Cucumis melo
MELO3C021107.2 Cucumis melo
Migut.D02482 Erythranthe guttata
Migut.K00158 Erythranthe guttata
Migut.N00645 Erythranthe guttata
MSTRG.10780 Avicennia marina
MSTRG.18822 Avicennia marina
MSTRG.24384 Avicennia marina
Nitab4.5_0000123g0380 Nicotiana tabacum
Nitab4.5_0000296g0040 Nicotiana tabacum
Nitab4.5_0000497g0050 Nicotiana tabacum
Nitab4.5_0002671g0110 Nicotiana tabacum
Nitab4.5_0003725g0020 Nicotiana tabacum
Nitab4.5_0006376g0040 Nicotiana tabacum
Nitab4.5_0010531g0020 Nicotiana tabacum
Nitab4.5_0011877g0010 Nicotiana tabacum
Nn1g08125 Nelumbo nucifera
Nn5g30635 Nelumbo nucifera
Nn8g39174 Nelumbo nucifera
Oeu003626.1 Olea europaea
Oeu019878.2 Olea europaea
Oeu029942.1 Olea europaea
Oeu050729.1 Olea europaea
Oeu053076.2 Olea europaea
Oeu056450.4 Olea europaea
Oeu057851.2 Olea europaea
Oeu064757.3 Olea europaea
Os01g0562400 Oryza sativa ssp. japonica
Os01g0563000 Oryza sativa ssp. japonica
Os01g0564300 Oryza sativa ssp. japonica
Os02g0491400 Oryza sativa ssp. japonica
Os04g0352400 Oryza sativa ssp. japonica
Os08g0525600 Oryza sativa ssp. japonica
Peaxi162Scf00003g05237 Petunia axillaris
Peaxi162Scf00003g05239 Petunia axillaris
Peaxi162Scf00081g02735 Petunia axillaris
Peaxi162Scf00286g00929 Petunia axillaris
Peaxi162Scf00487g00114 Petunia axillaris
Peaxi162Scf01133g00014 Petunia axillaris
PGR044G1772 Punica granatum
PGR142G3207 Punica granatum
PGSC0003DMG400007177 Solanum tuberosum
PGSC0003DMG400010624 Solanum tuberosum
PGSC0003DMG400020107 Solanum tuberosum
PGSC0003DMG400020802 Solanum tuberosum
PGSC0003DMG400031522 Solanum tuberosum
Phvul.001G029000 Phaseolus vulgaris
Phvul.001G118200 Phaseolus vulgaris
Phvul.003G064500 Phaseolus vulgaris
Phvul.003G177200 Phaseolus vulgaris
Phvul.008G133100 Phaseolus vulgaris
Phvul.010G024500 Phaseolus vulgaris
Potri.002G117200 Populus trichocarpa
Potri.002G248300 Populus trichocarpa
Potri.006G033400 Populus trichocarpa
Potri.014G149400 Populus trichocarpa
Potri.016G031166 Populus trichocarpa
Pp3c16_920 Physcomitrium patens
Pp3c19_2600 Physcomitrium patens
PRCOL_00001044 Prasinoderma coloniale
PRCOL_00002965 Prasinoderma coloniale
PRCOL_00005371 Prasinoderma coloniale
Prupe.1G172600 Prunus persica
Prupe.1G420900 Prunus persica
Prupe.8G194100 Prunus persica
Psat3g081840 Pisum sativum
Psat3g150280 Pisum sativum
Psat4g204920 Pisum sativum
Psat6g017640 Pisum sativum
Psat7g076200 Pisum sativum
PSO017G3056 Papaver somniferum
PSO210G1399 Papaver somniferum
PSO210G2674 Papaver somniferum
PSO423G0151 Papaver somniferum
PSO423G0180 Papaver somniferum
PSO541G2479 Papaver somniferum
PSO596G0028 Papaver somniferum
PSO675G5816 Papaver somniferum
PSO675G6938 Papaver somniferum
QL06p027392 Quercus lobata
QL07p013318 Quercus lobata
QL09p049260 Quercus lobata
QL12p038350 Quercus lobata
RcHm_v2.0_Chr4g0412331 Rosa chinensis
RcHm_v2.0_Chr6g0283541 Rosa chinensis
RcHm_v2.0_Chr6g0309861 Rosa chinensis
RcHm_v2.0_Chr7g0204881 Rosa chinensis
Rhsim01G0249900 Rhododendron simsii
Rhsim06G0063300 Rhododendron simsii
Sabra02G0091900 Salix brachista
Sabra02G0189000 Salix brachista
Sabra06G0022100 Salix brachista
Sabra14G0112600 Salix brachista
SalBow1G3833 Salvia bowleyana
SalBow1G6080 Salvia bowleyana
SalBow2G2341 Salvia bowleyana
SalBow6G2280 Salvia bowleyana
Sc17g0001910 Simmondsia chinensis
Sc19g0007430 Simmondsia chinensis
Sc26g0004220 Simmondsia chinensis
Sed0005666 Sechium edule
Sed0010939 Sechium edule
Sed0025920 Sechium edule
SEGI_25034 Sequoiadendron giganteum
SEGI_29388 Sequoiadendron giganteum
SGA_v2.0_scaffold152G36820 Striga asiatica
SGA_v2.0_scaffold156G37298 Striga asiatica
SGA_v2.0_scaffold19G08791 Striga asiatica
SGA_v2.0_scaffold240G44133 Striga asiatica
SMO171G0021 Selaginella moellendorffii
SMO203G0114 Selaginella moellendorffii
SMO234G0048 Selaginella moellendorffii
Solyc04g077660.3 Solanum lycopersicum
Solyc06g083190.4 Solanum lycopersicum
Solyc09g057660.3 Solanum lycopersicum
Solyc09g092690.3 Solanum lycopersicum
Solyc10g078250.1 Solanum lycopersicum
Sopen04g031300 Solanum pennellii
Sopen06g034580 Solanum pennellii
Sopen09g021120 Solanum pennellii
Sopen09g035620 Solanum pennellii
Sopen10g028920 Solanum pennellii
Sp2g18930 Schrenkiella parvula
Sp3g22860 Schrenkiella parvula
TAR362G0793 Trochodendron aralioides
TAR636G2828 Trochodendron aralioides
THA.LOC104808804 Tarenaya hassleriana
THA.LOC104818983 Tarenaya hassleriana
THA.LOC104821660 Tarenaya hassleriana
THA.LOC104822478 Tarenaya hassleriana
THA.LOC104823680 Tarenaya hassleriana
Thecc.01G215200 Theobroma cacao
Thecc.04G190800 Theobroma cacao
Thecc.08G086100 Theobroma cacao
Thhalv10002468m.g Eutrema salsugineum
Thhalv10003906m.g Eutrema salsugineum
Thhalv10024088m.g Eutrema salsugineum
TPR.G11848 Trifolium pratense
TPR.G13111 Trifolium pratense
TPR.G16458 Trifolium pratense
TPR.G23183 Trifolium pratense
TPR.G29152 Trifolium pratense
TWI36G0946 Tripterygium wilfordii
TWI74G1305 Tripterygium wilfordii
TWI75G0156 Tripterygium wilfordii
unitig_0.g124 Utricularia gibba
unitig_0.g410 Utricularia gibba
unitig_746.g26596 Utricularia gibba
unitig_899.g15400 Utricularia gibba
vmacro14711 Vaccinium macrocarpon
VMungo0251G3607 Vigna mungo
VMungo0331G1976 Vigna mungo
VMungo0647G2167 Vigna mungo
VMungo1383G2838 Vigna mungo
VMungo1383G3278 Vigna mungo
Zm00001eb036130 Zea mays
Zm00001eb087350 Zea mays
Zm00001eb241230 Zea mays
Zm00001eb339750 Zea mays

User provided reference genes

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