Gene: AT3G25230

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G25230
  • Transcript Identifier AT3G25230.1
  • Gene Type Coding gene
  • Location Chr3 : 9188257-9191137 : positive

Gene Family Information

  • ID HOM05D000371
  • #Genes/#Species 1303/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G25230.1
  • symbol ROF1
  • Alias ATFKBP62,FKBP62,FK506 BINDING PROTEIN 62
  • uniprot Q38931

Descriptions

  • Description rotamase FKBP 1
  • Computational description rotamase FKBP 1 (ROF1); FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding; INVOLVED IN: response to cadmium ion, response to heat, response to wounding; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FKBP-type peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT5G48570.1); Has 23486 Blast hits to 15115 proteins in 1840 species: Archae - 212; Bacteria - 9362; Metazoa - 6200; Fungi - 1716; Plants - 1995; Viruses - 0; Other Eukaryotes - 4001 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061077
IBA
GOA Databasechaperone-mediated protein folding
GO:0000413
IBA
GOA Databaseprotein peptidyl-prolyl isomerization
GO:0009611
IEP
Gene Ontologyresponse to wounding1
GO:0009845
IMP
Gene Ontologyseed germination2
GO:0006970
IMP
Gene Ontologyresponse to osmotic stress2
GO:0070370
IMP
Gene Ontologycellular heat acclimation3
GO:0009408
IMP
Gene Ontologyresponse to heat3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003755
IBA
GOA Databasepeptidyl-prolyl cis-trans isomerase activity
GO:0003755
IEA
Gene Ontologypeptidyl-prolyl cis-trans isomerase activity
GO:0003755
IEA
InterPropeptidyl-prolyl cis-trans isomerase activity
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0005515
IEA
InterProprotein binding
GO:0005516
IEA
GOA Databasecalmodulin binding
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0080025
IDA
Gene Ontologyphosphatidylinositol-3,5-bisphosphate binding2
GO:0032266
IDA
Gene Ontologyphosphatidylinositol-3-phosphate binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
HDA
Gene Ontologycytosol4
GO:0005737
IBA
IEA
GOA Databasecytoplasm
GO:0005737
IDA
Gene Ontologycytoplasm3
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus3
GO:0071944
IDA
Gene Ontologycell periphery2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR019734 Tetratricopeptide repeat
IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain
IPR001440 Tetratricopeptide repeat 1
Mapman id Description
18.13.2 Protein modification.protein folding.protein folding catalyst (FKBP)