Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02210 Brassica napus
A03p06200 Brassica napus
A05p36910 Brassica napus
A08p35600 Brassica napus
A10p06050 Brassica napus
A10p24540 Brassica napus
Aa31LG3G90 Aethionema arabicum
Aa31LG4G15590 Aethionema arabicum
Aa31LG4G15600 Aethionema arabicum
Aa31sc24G80 Aethionema arabicum
Aa31sc510G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4787 Anthoceros agrestis
Actinidia02941 Actinidia chinensis
Actinidia07024 Actinidia chinensis
Actinidia07741 Actinidia chinensis
Actinidia13884 Actinidia chinensis
Actinidia14040 Actinidia chinensis
Actinidia23930 Actinidia chinensis
Actinidia34416 Actinidia chinensis
Actinidia36894 Actinidia chinensis
Actinidia37192 Actinidia chinensis
Actinidia37193 Actinidia chinensis
Ah.08g219700 Amaranthus hybridus
Ah.10g036870 Amaranthus hybridus
Ah.15g097680 Amaranthus hybridus
AL1G17720 Arabidopsis lyrata
AL3G24200 Arabidopsis lyrata
AL5G25480 Arabidopsis lyrata
AL6G24440 Arabidopsis lyrata
AL8G35900 Arabidopsis lyrata
Aqoxy1G00919 Aquilegia oxysepala
Aqoxy2G02239 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.09ZGYD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.18CGRH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1SV5F7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2Q6FKK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.53UM4C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FE3PYB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J8X087 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N9TR2Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P4AZJC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RALB70 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZFP9XM Arachis hypogaea
AT1G07540 Arabidopsis thaliana
AT3G12560 Arabidopsis thaliana
AT3G46590 Arabidopsis thaliana
AT3G53790 Arabidopsis thaliana
AT5G13820 Arabidopsis thaliana
AT5G59430 Arabidopsis thaliana
ATR0559G022 Amborella trichopoda
ATR0680G302 Amborella trichopoda
Atru.chr12.424 Acer truncatum
Atru.chr3.3982 Acer truncatum
Atru.chr3.3985 Acer truncatum
Atru.chr8.1987 Acer truncatum
AUR62001769 Chenopodium quinoa
AUR62009557 Chenopodium quinoa
AUR62012108 Chenopodium quinoa
AUR62030248 Chenopodium quinoa
AUR62039363 Chenopodium quinoa
BcaB01g05334 Brassica carinata
BcaB02g06731 Brassica carinata
BcaB03g13388 Brassica carinata
BcaB04g21070 Brassica carinata
BcaB06g25531 Brassica carinata
BcaB08g36259 Brassica carinata
BcaC02g09130 Brassica carinata
BcaC04g19077 Brassica carinata
BcaC04g19774 Brassica carinata
BcaC04g19775 Brassica carinata
BcaC04g24251 Brassica carinata
BcaC05g24690 Brassica carinata
BcaC05g29257 Brassica carinata
BcaC09g48252 Brassica carinata
BcaNung04181 Brassica carinata
BNapus_Darmor_BZH_scaffold_149p00080 Brassica napus
BolC1t05203H Brassica oleracea
BolC2t06591H Brassica oleracea
BolC3t13222H Brassica oleracea
BolC5t29325H Brassica oleracea
BolC5t34202H Brassica oleracea
BolC8t47111H Brassica oleracea
BolC9t59164H Brassica oleracea
BraA01t04128Z Brassica rapa
BraA02t05193Z Brassica rapa
BraA03t09954Z Brassica rapa
BraA04t16286Z Brassica rapa
BraA05t22490Z Brassica rapa
BraA08t35466Z Brassica rapa
BraA10t42867Z Brassica rapa
BraA10t43746Z Brassica rapa
BraA10t44518Z Brassica rapa
C01p52630 Brassica napus
C02p06450 Brassica napus
C03p07210 Brassica napus
C04p38770 Brassica napus
C05p05540 Brassica napus
C05p55360 Brassica napus
C08p03130 Brassica napus
C09p51820 Brassica napus
C09p63280 Brassica napus
CAN.G1013.32 Capsicum annuum
CAN.G1366.18 Capsicum annuum
CAN.G250.9 Capsicum annuum
CAN.G394.65 Capsicum annuum
CANSAT54G2294 Cannabis sativa
CANSAT56G1503 Cannabis sativa
CARHR007310 Cardamine hirsuta
CARHR087060 Cardamine hirsuta
CARHR155220 Cardamine hirsuta
CARHR163690 Cardamine hirsuta
CARHR199620 Cardamine hirsuta
CARHR285800 Cardamine hirsuta
Carub.0001s0686 Capsella rubella
Carub.0003s1190 Capsella rubella
Carub.0005s1286 Capsella rubella
Carub.0005s2037 Capsella rubella
Carub.0006s1200 Capsella rubella
Carub.0008s2010 Capsella rubella
Ca_01318_v3 Cicer arietinum L.
Ca_05885_v3 Cicer arietinum L.
Ca_07556_v3 Cicer arietinum L.
Ca_07557_v3 Cicer arietinum L.
Ca_08169_v3 Cicer arietinum L.
Ca_17111_v3 Cicer arietinum L.
CBR_g19762 Chara braunii
CBR_g54419 Chara braunii
Cc01_g13040 Coffea canephora
Cc02_g07660 Coffea canephora
CDE02G0406 Ceratophyllum demersum
CDE02G2558 Ceratophyllum demersum
CDE02G3130 Ceratophyllum demersum
CDE08G1220 Ceratophyllum demersum
CDE09G0732 Ceratophyllum demersum
CDE09G0769 Ceratophyllum demersum
Cfa001457 Carpinus fangiana
Cfa011519 Carpinus fangiana
Cfa017364 Carpinus fangiana
Ciclev10013507m.g Citrus clementina
Ciclev10027927m.g Citrus clementina
Ciclev10030878m.g Citrus clementina
CiPaw.01G288800 Carya illinoinensis
CiPaw.02G185100 Carya illinoinensis
CiPaw.09G194100 Carya illinoinensis
CiPaw.10G146300 Carya illinoinensis
CiPaw.13G092400 Carya illinoinensis
CiPaw.14G067700 Carya illinoinensis
ClCG03G001390 Citrullus lanatus
ClCG07G003440 Citrullus lanatus
COL.COLO4_14785 Corchorus olitorius
COL.COLO4_18531 Corchorus olitorius
Cpa.g.sc1.421 Carica papaya
Cpa.g.sc81.127 Carica papaya
CsaV3_1G034410 Cucumis sativus L.
CsaV3_5G008180 Cucumis sativus L.
CsaV3_6G016740 Cucumis sativus L.
CSS0004039 Camellia sinensis var. sinensis
CSS0005261 Camellia sinensis var. sinensis
CSS0010319 Camellia sinensis var. sinensis
CSS0023153 Camellia sinensis var. sinensis
DCAR_005963 Daucus carota
DCAR_007442 Daucus carota
DCAR_011714 Daucus carota
DCAR_015105 Daucus carota
DCAR_025295 Daucus carota
DCAR_027607 Daucus carota
Dinv00886 Davidia involucrata
Dinv00887 Davidia involucrata
Dinv04181 Davidia involucrata
Dinv04183 Davidia involucrata
Dinv15860 Davidia involucrata
Dinv17022 Davidia involucrata
Dinv26029 Davidia involucrata
Dinv42970 Davidia involucrata
Dinv43129 Davidia involucrata
Duzib114G0062 Durio zibethinus
Duzib150G1153 Durio zibethinus
Duzib168G0294 Durio zibethinus
Duzib170G0081 Durio zibethinus
ECA232G2448 Erigeron canadensis
ECA233G1173 Erigeron canadensis
ECA236G0187 Erigeron canadensis
ECA238G2199 Erigeron canadensis
ECA248G1165 Erigeron canadensis
EL10Ac2g04732 Beta vulgaris
EL10Ac7g16036 Beta vulgaris
Eucgr.B02351 Eucalyptus grandis
Eucgr.J01245 Eucalyptus grandis
FAN01G1782 Fragaria x ananassa
FAN01G3122 Fragaria x ananassa
FAN02G1919 Fragaria x ananassa
FAN03G1477 Fragaria x ananassa
FAN05G5217 Fragaria x ananassa
FAN06G1191 Fragaria x ananassa
FAN06G2434 Fragaria x ananassa
FAN09G2206 Fragaria x ananassa
FAN10G1936 Fragaria x ananassa
FAN10G3188 Fragaria x ananassa
FAN11G3031 Fragaria x ananassa
FAN14G2175 Fragaria x ananassa
FAN16G2884 Fragaria x ananassa
FAN21G2472 Fragaria x ananassa
FAN25G0218 Fragaria x ananassa
FvH4_3g36520 Fragaria vesca
FvH4_6g13540 Fragaria vesca
FvH4_7g22710 Fragaria vesca
Glyma.07G133000 Glycine max
Glyma.11G138700 Glycine max
Glyma.11G219500 Glycine max
Glyma.12G062300 Glycine max
Glyma.13G337100 Glycine max
Glyma.15G037300 Glycine max
Glyma.18G037900 Glycine max
Glyma.18G182400 Glycine max
Gohir.A03G043400 Gossypium hirsutum
Gohir.A05G094600 Gossypium hirsutum
Gohir.A06G166400 Gossypium hirsutum
Gohir.A09G155100 Gossypium hirsutum
Gohir.A10G220500 Gossypium hirsutum
Gohir.A13G018200 Gossypium hirsutum
Gohir.D03G124000 Gossypium hirsutum
Gohir.D05G095000 Gossypium hirsutum
Gohir.D06G171900 Gossypium hirsutum
Gohir.D09G150700 Gossypium hirsutum
Gohir.D10G232700 Gossypium hirsutum
Gohir.D13G019200 Gossypium hirsutum
Gorai.003G130700 Gossypium raimondii
Gorai.006G172000 Gossypium raimondii
Gorai.009G098300 Gossypium raimondii
Gorai.010G200900 Gossypium raimondii
Gorai.011G266100 Gossypium raimondii
Gorai.013G021300 Gossypium raimondii
GSVIVG01016524001 Vitis vinifera
GSVIVG01024936001 Vitis vinifera
GSVIVG01034156001 Vitis vinifera
HanXRQChr02g0033201 Helianthus annuus
HanXRQChr05g0135051 Helianthus annuus
HanXRQChr06g0178961 Helianthus annuus
HanXRQChr07g0189581 Helianthus annuus
HanXRQChr07g0201401 Helianthus annuus
HanXRQChr08g0220911 Helianthus annuus
HanXRQChr09g0249961 Helianthus annuus
HanXRQChr12g0369571 Helianthus annuus
HanXRQChr16g0500651 Helianthus annuus
Haze_17083 Corylus avellana
Haze_20807 Corylus avellana
Haze_24117 Corylus avellana
Hma1.2p1_0615F.1_g189855 Hydrangea macrophylla
Hma1.2p1_1399F.1_g280870 Hydrangea macrophylla
Hma1.2p1_1420F.1_g282320 Hydrangea macrophylla
HPP92_026922 Vanilla planifolia
Hund04943 Selenicereus undatus
Hund13777 Selenicereus undatus
Hund16079 Selenicereus undatus
Hund18897 Selenicereus undatus
Lalb_Chr01g0003601 Lupinus albus
Lalb_Chr03g0026551 Lupinus albus
Lalb_Chr03g0042311 Lupinus albus
Lalb_Chr04g0251171 Lupinus albus
Lalb_Chr10g0104591 Lupinus albus
Lalb_Chr15g0084701 Lupinus albus
Lalb_Chr17g0346251 Lupinus albus
Lalb_Chr18g0053221 Lupinus albus
Lalb_Chr19g0125281 Lupinus albus
Lj1A939T62 Lonicera japonica
Lj1C149G8 Lonicera japonica
Lj1g0017865 Lotus japonicus
Lj2A1065T24 Lonicera japonica
Lj3g0017284 Lotus japonicus
Lj3g0023191 Lotus japonicus
Lj6g0024837 Lotus japonicus
Lj8A83T57 Lonicera japonica
Lsat_1_v5_gn_2_118901 Lactuca sativa
Lsat_1_v5_gn_2_82780 Lactuca sativa
Lsat_1_v5_gn_5_169961 Lactuca sativa
Lsat_1_v5_gn_8_15301 Lactuca sativa
Lsat_1_v5_gn_8_73881 Lactuca sativa
Lsat_1_v5_gn_9_66001 Lactuca sativa
Manes.01G172100 Manihot esculenta
Manes.02G131166 Manihot esculenta
Manes.07G117300 Manihot esculenta
Manes.10G029300 Manihot esculenta
Mapoly0043s0095 Marchantia polymorpha
MBI05_g28378_MAGBIO Magnolia biondii
MBI14_g12119_MAGBIO Magnolia biondii
MD01G1135700 Malus domestica
MD03G1089900 Malus domestica
MD04G1130300 Malus domestica
MD07G1200400 Malus domestica
MD11G1099200 Malus domestica
MD12G1143400 Malus domestica
Medtr2g097290 Medicago truncatula
Medtr3g067935 Medicago truncatula
Medtr5g080010 Medicago truncatula
Medtr7g061840 Medicago truncatula
MELO3C020620.2 Cucumis melo
MELO3C023869.2 Cucumis melo
MELO3C025905.2 Cucumis melo
Migut.D02080 Erythranthe guttata
Migut.F00779 Erythranthe guttata
MSTRG.21208 Avicennia marina
MSTRG.279 Avicennia marina
MSTRG.8257 Avicennia marina
Nitab4.5_0000042g0050 Nicotiana tabacum
Nitab4.5_0000272g0060 Nicotiana tabacum
Nitab4.5_0000463g0100 Nicotiana tabacum
Nitab4.5_0001002g0020 Nicotiana tabacum
Nitab4.5_0001097g0040 Nicotiana tabacum
Nitab4.5_0001326g0080 Nicotiana tabacum
Nitab4.5_0002872g0040 Nicotiana tabacum
Nitab4.5_0004074g0040 Nicotiana tabacum
Nitab4.5_0007132g0010 Nicotiana tabacum
Nitab4.5_0008900g0010 Nicotiana tabacum
Nitab4.5_0009749g0020 Nicotiana tabacum
Nn2g11144 Nelumbo nucifera
Nn2g13376 Nelumbo nucifera
Oeu002427.1 Olea europaea
Oeu004160.1 Olea europaea
Oeu016528.1 Olea europaea
Oeu017399.2 Olea europaea
Oeu026707.1 Olea europaea
Os02g0817800 Oryza sativa ssp. japonica
Os03g0274300 Oryza sativa ssp. japonica
Peaxi162Scf00122g00157 Petunia axillaris
Peaxi162Scf00658g00088 Petunia axillaris
Peaxi162Scf00760g00326 Petunia axillaris
Peaxi162Scf00774g00021 Petunia axillaris
Peaxi162Scf00886g00021 Petunia axillaris
PGR044G1705 Punica granatum
PGR102G0938 Punica granatum
PGR119G0068 Punica granatum
PGR142G0792 Punica granatum
PGSC0003DMG400002138 Solanum tuberosum
PGSC0003DMG400006353 Solanum tuberosum
PGSC0003DMG400023432 Solanum tuberosum
PGSC0003DMG400030324 Solanum tuberosum
Phvul.001G232700 Phaseolus vulgaris
Phvul.008G103000 Phaseolus vulgaris
Phvul.011G063400 Phaseolus vulgaris
Phvul.L006443 Phaseolus vulgaris
Potri.001G241600 Populus trichocarpa
Potri.006G086500 Populus trichocarpa
Potri.008G057300 Populus trichocarpa
Potri.009G032000 Populus trichocarpa
Potri.010G202400 Populus trichocarpa
Pp3c17_13470 Physcomitrium patens
Pp3c18_7270 Physcomitrium patens
Pp3c18_7410 Physcomitrium patens
Pp3c21_13990 Physcomitrium patens
Prupe.2G237100 Prunus persica
Prupe.6G074100 Prunus persica
Prupe.6G256900 Prunus persica
Psat2g040240 Pisum sativum
Psat3g138760 Pisum sativum
Psat5g123040 Pisum sativum
Psat5g286760 Pisum sativum
PSO063G2845 Papaver somniferum
PSO151G0094 Papaver somniferum
PSO339G2542 Papaver somniferum
PSO339G3709 Papaver somniferum
QL01p031422 Quercus lobata
QL07p048632 Quercus lobata
QL08p059536 Quercus lobata
RcHm_v2.0_Chr1g0367801 Rosa chinensis
RcHm_v2.0_Chr3g0466401 Rosa chinensis
RcHm_v2.0_Chr5g0065391 Rosa chinensis
RcHm_v2.0_Chr5g0065401 Rosa chinensis
RcHm_v2.0_Chr5g0065451 Rosa chinensis
Rhsim01G0229600 Rhododendron simsii
Rhsim01G0229900 Rhododendron simsii
Rhsim03G0129400 Rhododendron simsii
Rhsim06G0146200 Rhododendron simsii
Rhsim09G0166900 Rhododendron simsii
Rhsim13G0068700 Rhododendron simsii
Rhsim13G0081000 Rhododendron simsii
Rhsim13G0081200 Rhododendron simsii
Rhsim13G0081300 Rhododendron simsii
Sabra08G0041800 Salix brachista
Sabra09G0022700 Salix brachista
Sabra10G0156200 Salix brachista
Sabra16G0146100 Salix brachista
SalBow3G4359 Salvia bowleyana
SalBow6G2369 Salvia bowleyana
Sc11g0007910 Simmondsia chinensis
Sc12g0001420 Simmondsia chinensis
Sc21g0005880 Simmondsia chinensis
Sed0003978 Sechium edule
Sed0009319 Sechium edule
Sed0021170 Sechium edule
Sed0022943 Sechium edule
Sed0025539 Sechium edule
SEGI_00484 Sequoiadendron giganteum
SGA_v2.0_scaffold203G41539 Striga asiatica
SGA_v2.0_scaffold221G42674 Striga asiatica
SGA_v2.0_scaffold2G01014 Striga asiatica
SMO203G0015 Selaginella moellendorffii
SMO271G0091 Selaginella moellendorffii
Solyc05g054410.4 Solanum lycopersicum
Solyc06g005590.4 Solanum lycopersicum
Solyc06g034073.1 Solanum lycopersicum
Solyc06g076270.3 Solanum lycopersicum
Solyc12g027690.1 Solanum lycopersicum
Solyc12g027705.1 Solanum lycopersicum
Sopen04g005820 Solanum pennellii
Sopen05g032900 Solanum pennellii
Sopen06g001550 Solanum pennellii
Sopen06g032700 Solanum pennellii
Sp1g06270 Schrenkiella parvula
Sp3g10700 Schrenkiella parvula
Sp5g08590 Schrenkiella parvula
Sp5g15110 Schrenkiella parvula
Sp6g21110 Schrenkiella parvula
Sp6g30200 Schrenkiella parvula
TAR633G1047 Trochodendron aralioides
THA.LOC104799342 Tarenaya hassleriana
THA.LOC104799727 Tarenaya hassleriana
THA.LOC104800672 Tarenaya hassleriana
THA.LOC104806560 Tarenaya hassleriana
THA.LOC104810154 Tarenaya hassleriana
THA.LOC104810771 Tarenaya hassleriana
THA.LOC104816078 Tarenaya hassleriana
Thecc.05G038100 Theobroma cacao
Thecc.09G319700 Theobroma cacao
Thecc.10G036200 Theobroma cacao
Thhalv10002472m.g Eutrema salsugineum
Thhalv10007062m.g Eutrema salsugineum
Thhalv10011058m.g Eutrema salsugineum
Thhalv10012893m.g Eutrema salsugineum
Thhalv10013086m.g Eutrema salsugineum
Thhalv10020283m.g Eutrema salsugineum
TPR.G15844 Trifolium pratense
TPR.G1687 Trifolium pratense
TPR.G34287 Trifolium pratense
TPR.G3497 Trifolium pratense
TWI15G0927 Tripterygium wilfordii
TWI31G1035 Tripterygium wilfordii
TWI38G1431 Tripterygium wilfordii
TWI63G1690 Tripterygium wilfordii
TWI75G0926 Tripterygium wilfordii
TWI79G0413 Tripterygium wilfordii
unitig_32.g11823 Utricularia gibba
unitig_37.g12449 Utricularia gibba
unitig_747.g22039 Utricularia gibba
unitig_748.g8675 Utricularia gibba
vmacro03059 Vaccinium macrocarpon
vmacro07183 Vaccinium macrocarpon
vmacro10223 Vaccinium macrocarpon
vmacro14544 Vaccinium macrocarpon
vmacro22503 Vaccinium macrocarpon
VMungo1080G1285 Vigna mungo
VMungo1383G3226 Vigna mungo
VMungo1383G3737 Vigna mungo
Zm00001eb012310 Zea mays
Zm00001eb397700 Zea mays
Zm00001eb424820 Zea mays

User provided reference genes

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