Gene: Sopen06g001550

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g001550
  • Transcript Identifier Sopen06g001550.2
  • Gene Type Coding gene
  • Location Spenn-ch06 : 696260-699739 : positive

Gene Family Information

  • ID HOM05D000758
  • #Genes/#Species 771/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g001550.2

Descriptions

  • Description Arabidopsis thaliana telomere-binding protein, putative (At1g07540) | TRF-like 2 (TRFL2) | FUNCTIONS IN: DNA binding | INVOLVED IN: regulation of transcription | EXPRESSED IN: petal, leaf whorl, flower | EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , Homeodomain-like , HTH transcriptional regulator, Myb-type, DNA-binding , Homeodomain-related | BEST Arabidopsis thaliana protein match is: TRF-like 1
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009873
ISO
PLAZA Integrative Orthologyethylene-activated signaling pathway AT5G59430
GO:0032204
ISO
PLAZA Integrative Orthologyregulation of telomere maintenance Os02g0817800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G46590
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity Os02g0817800
GO:0042162
ISO
PLAZA Integrative Orthologytelomeric DNA binding AT3G46590
GO:0008301
ISO
PLAZA Integrative OrthologyDNA binding, bending AT3G46590
GO:0003691
ISO
PLAZA Integrative Orthologydouble-stranded telomeric DNA binding AT5G59430

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000781
ISO
PLAZA Integrative Orthologychromosome, telomeric region Os02g0817800
GO:0031965
ISO
PLAZA Integrative Orthologynuclear membrane AT5G59430
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G59430
GO:0016020
ISO
PLAZA Integrative Orthologymembrane AT5G59430
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G59430

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR031105 Telomere repeat-binding protein, plant
IPR009057 Homeobox-like domain superfamily
IPR029071 Ubiquitin-like domain superfamily
Mapman id Description
13.2.5.3 Cell cycle organisation.DNA replication.telomere replication.telomeric dsDNA-binding protein