Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p19340 Brassica napus
A02p11210 Brassica napus
A02p24320 Brassica napus
A03p15300 Brassica napus
A03p17020 Brassica napus
A03p25640 Brassica napus
A03p31820 Brassica napus
A03p31830 Brassica napus
A04p34360 Brassica napus
A05p01360 Brassica napus
A08p20290 Brassica napus
A09p00220 Brassica napus
A09p69090 Brassica napus
A10p10710 Brassica napus
Aa31LG10G15660 Aethionema arabicum
Aa31LG1G10950 Aethionema arabicum
Aa31LG1G27750 Aethionema arabicum
Aa31LG3G9280 Aethionema arabicum
Aa31LG5G900 Aethionema arabicum
Actinidia05515 Actinidia chinensis
Actinidia09923 Actinidia chinensis
Actinidia22726 Actinidia chinensis
Actinidia26913 Actinidia chinensis
Actinidia27327 Actinidia chinensis
Actinidia28498 Actinidia chinensis
Actinidia28668 Actinidia chinensis
Actinidia30515 Actinidia chinensis
Actinidia39285 Actinidia chinensis
AL136U10030 Arabidopsis lyrata
AL1G11070 Arabidopsis lyrata
AL4G25290 Arabidopsis lyrata
AL4G25300 Arabidopsis lyrata
AL4G25310 Arabidopsis lyrata
AL4G45710 Arabidopsis lyrata
AL5G44160 Arabidopsis lyrata
AL6G52310 Arabidopsis lyrata
AL8G27860 Arabidopsis lyrata
Aqoxy1G02150 Aquilegia oxysepala
Aqoxy1G03683 Aquilegia oxysepala
Aqoxy1G04056 Aquilegia oxysepala
Aqoxy5G04173 Aquilegia oxysepala
Aqoxy7G00138 Aquilegia oxysepala
Aqoxy7G00139 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6CVG62 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J13BPB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LQ8VWD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S7LJ0Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SWV57T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WHG5AA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XL1L9T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XL6SY1 Arachis hypogaea
AT1G01380 Arabidopsis thaliana
AT2G30420 Arabidopsis thaliana
AT2G30424 Arabidopsis thaliana
AT2G30432 Arabidopsis thaliana
AT2G46410 Arabidopsis thaliana
AT4G01060 Arabidopsis thaliana
AT5G53200 Arabidopsis thaliana
ATR0053G044 Amborella trichopoda
ATR0706G142 Amborella trichopoda
ATR0706G282 Amborella trichopoda
Atru.chr1.254 Acer truncatum
Atru.chr10.2225 Acer truncatum
Atru.chr5.641 Acer truncatum
Atru.chr6.3160 Acer truncatum
BcaB01g02342 Brassica carinata
BcaB01g04105 Brassica carinata
BcaB01g04232 Brassica carinata
BcaB01g06152 Brassica carinata
BcaB05g22023 Brassica carinata
BcaB06g29487 Brassica carinata
BcaB06g29488 Brassica carinata
BcaB08g35682 Brassica carinata
BcaC01g05068 Brassica carinata
BcaC01g05997 Brassica carinata
BcaC01g06229 Brassica carinata
BcaC01g06841 Brassica carinata
BcaC02g07029 Brassica carinata
BcaC02g12684 Brassica carinata
BcaC02g12686 Brassica carinata
BcaC02g12805 Brassica carinata
BcaC03g14444 Brassica carinata
BcaC03g16069 Brassica carinata
BcaC04g20488 Brassica carinata
BcaC04g24122 Brassica carinata
BcaC07g42358 Brassica carinata
BcaC07g42786 Brassica carinata
BcaC09g50526 Brassica carinata
BcaNung01608 Brassica carinata
BolC1t02386H Brassica oleracea
BolC2t08000H Brassica oleracea
BolC2t09849H Brassica oleracea
BolC3t12565H Brassica oleracea
BolC3t14195H Brassica oleracea
BolC3t14385H Brassica oleracea
BolC3t15409H Brassica oleracea
BolC3t16158H Brassica oleracea
BolC4t21805H Brassica oleracea
BolC4t28704H Brassica oleracea
BolC8t48728H Brassica oleracea
BolC8t52880H Brassica oleracea
BolC9t53020H Brassica oleracea
BolC9t57168H Brassica oleracea
BraA01t01875Z Brassica rapa
BraA02t06184Z Brassica rapa
BraA02t07422Z Brassica rapa
BraA03t10823Z Brassica rapa
BraA03t11779Z Brassica rapa
BraA03t12357Z Brassica rapa
BraA04t18897Z Brassica rapa
BraA05t19134Z Brassica rapa
BraA08t33988Z Brassica rapa
BraA09t35750Z Brassica rapa
BraA09t42246Z Brassica rapa
BraA10t43152Z Brassica rapa
C01p24300 Brassica napus
C01p24320 Brassica napus
C01p24340 Brassica napus
C01p24360 Brassica napus
C01p24380 Brassica napus
C01p24400 Brassica napus
C02p18580 Brassica napus
C02p38350 Brassica napus
C03p00040 Brassica napus
C03p17900 Brassica napus
C03p20080 Brassica napus
C03p30600 Brassica napus
C03p38840 Brassica napus
C04p01540 Brassica napus
C04p72160 Brassica napus
C08p10440 Brassica napus
C08p53660 Brassica napus
C09p00860 Brassica napus
C09p42990 Brassica napus
CAN.G80.35 Capsicum annuum
CAN.G921.13 Capsicum annuum
CAN.G986.30 Capsicum annuum
CANSAT21G2186 Cannabis sativa
CANSAT56G0405 Cannabis sativa
CANSAT56G1840 Cannabis sativa
CANSAT56G4235 Cannabis sativa
CANSAT64G2000 Cannabis sativa
CARHR001060 Cardamine hirsuta
CARHR054060 Cardamine hirsuta
CARHR123870 Cardamine hirsuta
CARHR141690 Cardamine hirsuta
CARHR249240 Cardamine hirsuta
CARHR266270 Cardamine hirsuta
Carub.0001s0085 Capsella rubella
Carub.0004s1158 Capsella rubella
Carub.0004s1159 Capsella rubella
Carub.0004s1160 Capsella rubella
Carub.0004s2911 Capsella rubella
Carub.0005s2840 Capsella rubella
Carub.0006s3612 Capsella rubella
Carub.0008s1340 Capsella rubella
Ca_00656_v3 Cicer arietinum L.
Ca_24518_v3 Cicer arietinum L.
Cc02_g11680 Coffea canephora
Cc02_g39130 Coffea canephora
Cc05_g04960 Coffea canephora
Cc09_g01680 Coffea canephora
CDE02G2614 Ceratophyllum demersum
CDE04G1395 Ceratophyllum demersum
CDE05G2587 Ceratophyllum demersum
CDE10G0523 Ceratophyllum demersum
CDE10G1191 Ceratophyllum demersum
Cfa000221 Carpinus fangiana
Cfa000270 Carpinus fangiana
Cfa003823 Carpinus fangiana
Cfa016365 Carpinus fangiana
Cfa022931 Carpinus fangiana
Ciclev10006315m.g Citrus clementina
Ciclev10017220m.g Citrus clementina
Ciclev10024111m.g Citrus clementina
CiPaw.01G074100 Carya illinoinensis
CiPaw.02G039400 Carya illinoinensis
CiPaw.03G162100 Carya illinoinensis
CiPaw.05G257600 Carya illinoinensis
CiPaw.09G087400 Carya illinoinensis
CiPaw.10G068400 Carya illinoinensis
CiPaw.10G070900 Carya illinoinensis
CiPaw.11G122900 Carya illinoinensis
CiPaw.11G184800 Carya illinoinensis
CiPaw.12G126900 Carya illinoinensis
ClCG01G000590 Citrullus lanatus
ClCG01G001970 Citrullus lanatus
COL.COLO4_06311 Corchorus olitorius
COL.COLO4_27684 Corchorus olitorius
COL.COLO4_35651 Corchorus olitorius
Cpa.g.c29502 Carica papaya
Cpa.g.sc3.55 Carica papaya
CsaV3_5G000690 Cucumis sativus L.
CSS0001340 Camellia sinensis var. sinensis
CSS0002311 Camellia sinensis var. sinensis
CSS0015793 Camellia sinensis var. sinensis
CSS0015923 Camellia sinensis var. sinensis
CSS0017773 Camellia sinensis var. sinensis
CSS0031622 Camellia sinensis var. sinensis
CSS0033018 Camellia sinensis var. sinensis
CSS0038041 Camellia sinensis var. sinensis
CSS0039428 Camellia sinensis var. sinensis
DCAR_014531 Daucus carota
Dinv02742 Davidia involucrata
Dinv13893 Davidia involucrata
Dinv17830 Davidia involucrata
Dinv18728 Davidia involucrata
Dinv20020 Davidia involucrata
Dinv28333 Davidia involucrata
Dinv38846 Davidia involucrata
Dinv39692 Davidia involucrata
Duzib068G0060 Durio zibethinus
Duzib084G1355 Durio zibethinus
Duzib133G0158 Durio zibethinus
Duzib138G1059 Durio zibethinus
Duzib160G0189 Durio zibethinus
Duzib192G0398 Durio zibethinus
Duzib192G0556 Durio zibethinus
Duzib235G0636 Durio zibethinus
Duzib235G0900 Durio zibethinus
Duzib251G0940 Durio zibethinus
Duzib268G0615 Durio zibethinus
ECA234G3604 Erigeron canadensis
Eucgr.A01720 Eucalyptus grandis
Eucgr.D01323 Eucalyptus grandis
Eucgr.D02360 Eucalyptus grandis
Eucgr.E00069 Eucalyptus grandis
Eucgr.E00851 Eucalyptus grandis
Eucgr.K00332 Eucalyptus grandis
Eucgr.K00803 Eucalyptus grandis
FAN01G0337 Fragaria x ananassa
FAN01G1254 Fragaria x ananassa
FAN02G3670 Fragaria x ananassa
FAN03G1631 Fragaria x ananassa
FAN03G2071 Fragaria x ananassa
FAN04G0908 Fragaria x ananassa
FAN05G2626 Fragaria x ananassa
FAN06G0339 Fragaria x ananassa
FAN06G1775 Fragaria x ananassa
FAN06G3883 Fragaria x ananassa
FAN06G4252 Fragaria x ananassa
FAN08G1800 Fragaria x ananassa
FAN09G0221 Fragaria x ananassa
FAN10G0893 Fragaria x ananassa
FAN10G1630 Fragaria x ananassa
FAN10G3163 Fragaria x ananassa
FAN10G3947 Fragaria x ananassa
FAN14G3065 Fragaria x ananassa
FAN14G3112 Fragaria x ananassa
FAN18G2227 Fragaria x ananassa
FAN18G4543 Fragaria x ananassa
FvH4_5g04380 Fragaria vesca
FvH4_6g43450 Fragaria vesca
FvH4_7g16170 Fragaria vesca
FvH4_7g31070 Fragaria vesca
Glyma.01G224900 Glycine max
Glyma.06G303100 Glycine max
Glyma.11G018200 Glycine max
Glyma.12G100600 Glycine max
Glyma.12G195200 Glycine max
Glyma.13G307300 Glycine max
Gohir.A01G075400 Gossypium hirsutum
Gohir.A06G207500 Gossypium hirsutum
Gohir.A06G208000 Gossypium hirsutum
Gohir.A07G138700 Gossypium hirsutum
Gohir.A11G096200 Gossypium hirsutum
Gohir.A12G156200 Gossypium hirsutum
Gohir.D01G062700 Gossypium hirsutum
Gohir.D06G213100 Gossypium hirsutum
Gohir.D06G213800 Gossypium hirsutum
Gohir.D07G143800 Gossypium hirsutum
Gohir.D11G100900 Gossypium hirsutum
Gohir.D12G159301 Gossypium hirsutum
Gorai.001G155700 Gossypium raimondii
Gorai.002G083400 Gossypium raimondii
Gorai.007G107400 Gossypium raimondii
Gorai.008G172400 Gossypium raimondii
Gorai.010G252300 Gossypium raimondii
Gorai.010G253000 Gossypium raimondii
GSVIVG01012633001 Vitis vinifera
GSVIVG01012725001 Vitis vinifera
GSVIVG01027071001 Vitis vinifera
GSVIVG01028716001 Vitis vinifera
GSVIVG01030609001 Vitis vinifera
HanXRQChr09g0263201 Helianthus annuus
HanXRQChr17g0560481 Helianthus annuus
Haze_06743 Corylus avellana
Haze_06798 Corylus avellana
Haze_09624 Corylus avellana
Haze_12888 Corylus avellana
Hma1.2p1_0613F.1_g189090 Hydrangea macrophylla
Hma1.2p1_2714F.1_g327420 Hydrangea macrophylla
HPP92_012399 Vanilla planifolia
Hund04834 Selenicereus undatus
Lalb_Chr03g0028831 Lupinus albus
Lalb_Chr05g0211601 Lupinus albus
Lalb_Chr09g0320681 Lupinus albus
Lalb_Chr15g0087601 Lupinus albus
Lj3g0013670 Lotus japonicus
Lj3g0022338 Lotus japonicus
LjContig00312_ERROPOS870357g0002853 Lotus japonicus
Lsat_1_v5_gn_4_33420 Lactuca sativa
Lsat_1_v5_gn_4_68300 Lactuca sativa
Manes.01G247600 Manihot esculenta
Manes.05G024900 Manihot esculenta
Manes.06G157500 Manihot esculenta
Manes.13G072300 Manihot esculenta
Manes.14G018401 Manihot esculenta
Manes.16G007100 Manihot esculenta
Manes.16G011800 Manihot esculenta
Manes.17G035600 Manihot esculenta
MBI02_g21863_MAGBIO Magnolia biondii
MBI06_g42871_MAGBIO Magnolia biondii
MBI07_g26937_MAGBIO Magnolia biondii
MD01G1215600 Malus domestica
MD05G1341500 Malus domestica
MD06G1104200 Malus domestica
MD07G1147100 Malus domestica
MD07G1285700 Malus domestica
MD17G1094200 Malus domestica
Medtr2g023100 Medicago truncatula
Medtr2g088730 Medicago truncatula
Medtr4g046737 Medicago truncatula
Medtr5g009460 Medicago truncatula
MELO3C034013.2 Cucumis melo
Migut.B01849 Erythranthe guttata
Migut.M00409 Erythranthe guttata
Migut.M01285 Erythranthe guttata
Migut.N01558 Erythranthe guttata
MSTRG.6554 Avicennia marina
Nitab4.5_0000838g0010 Nicotiana tabacum
Nitab4.5_0001176g0100 Nicotiana tabacum
Nitab4.5_0005894g0050 Nicotiana tabacum
Nitab4.5_0011592g0010 Nicotiana tabacum
Nn1g01828 Nelumbo nucifera
Nn1g03626 Nelumbo nucifera
Nn1g07041 Nelumbo nucifera
Nn1g07130 Nelumbo nucifera
Nn2g10217 Nelumbo nucifera
Nn3g18543 Nelumbo nucifera
Nn3g19058 Nelumbo nucifera
Oeu043179.1 Olea europaea
Oeu048072.1 Olea europaea
Oeu063921.1 Olea europaea
Oeu063925.1 Olea europaea
Os01g0619100 Oryza sativa ssp. japonica
Os01g0619900 Oryza sativa ssp. japonica
Peaxi162Scf00521g00814 Petunia axillaris
Peaxi162Scf00786g00439 Petunia axillaris
PGR004G0365 Punica granatum
PGR031G2198 Punica granatum
PGR042G1737 Punica granatum
PGR042G1777 Punica granatum
PGR142G2074 Punica granatum
PGSC0003DMG400000212 Solanum tuberosum
Phvul.002G163500 Phaseolus vulgaris
Phvul.005G114100 Phaseolus vulgaris
Phvul.011G105600 Phaseolus vulgaris
Potri.002G168900 Populus trichocarpa
Potri.004G015100 Populus trichocarpa
Potri.004G021300 Populus trichocarpa
Potri.007G122800 Populus trichocarpa
Potri.011G026300 Populus trichocarpa
Potri.012G031200 Populus trichocarpa
Potri.014G096300 Populus trichocarpa
Potri.015G022000 Populus trichocarpa
Potri.017G037000 Populus trichocarpa
Prupe.2G185200 Prunus persica
Prupe.2G307600 Prunus persica
Prupe.3G219200 Prunus persica
Prupe.4G025800 Prunus persica
Psat0s2105g0040 Pisum sativum
Psat0s785g0040 Pisum sativum
Psat1g181000 Pisum sativum
Psat5g264880 Pisum sativum
PSO135G1041 Papaver somniferum
PSO384G2121 Papaver somniferum
PSO478G1752 Papaver somniferum
PSO541G6179 Papaver somniferum
PSO675G1663 Papaver somniferum
PSO782G3744 Papaver somniferum
QL02p031030 Quercus lobata
QL04p056804 Quercus lobata
QL05p073168 Quercus lobata
QL05p074951 Quercus lobata
QL08p012780 Quercus lobata
QL08p012960 Quercus lobata
QL08p033621 Quercus lobata
QL93p0073_0483 Quercus lobata
RcHm_v2.0_Chr1g0359121 Rosa chinensis
RcHm_v2.0_Chr1g0380141 Rosa chinensis
RcHm_v2.0_Chr2g0159921 Rosa chinensis
RcHm_v2.0_Chr7g0195181 Rosa chinensis
Rhsim02G0111800 Rhododendron simsii
Rhsim06G0159100 Rhododendron simsii
Rhsim07G0083000 Rhododendron simsii
Rhsim13G0157500 Rhododendron simsii
Sabra02G0143100 Salix brachista
Sabra04G0007300 Salix brachista
Sabra04G0011800 Salix brachista
Sabra07G0099400 Salix brachista
Sabra11G0016900 Salix brachista
Sabra12G0020800 Salix brachista
Sabra14G0070700 Salix brachista
Sabra15G0016400 Salix brachista
Sabra17G0024200 Salix brachista
SalBow3G1867 Salvia bowleyana
SalBow5G2861 Salvia bowleyana
SalBow7G3622 Salvia bowleyana
Sc13g0009610 Simmondsia chinensis
Sed0009238 Sechium edule
Sed0019152 Sechium edule
Sed0023553 Sechium edule
SEGI_12170 Sequoiadendron giganteum
SEGI_13326 Sequoiadendron giganteum
SEGI_20113 Sequoiadendron giganteum
SEGI_23759 Sequoiadendron giganteum
SEGI_28615 Sequoiadendron giganteum
SEGI_35348 Sequoiadendron giganteum
SEGI_36425 Sequoiadendron giganteum
SEGI_40119 Sequoiadendron giganteum
SGA_v2.0_scaffold7G03880 Striga asiatica
SHI13236 Sapria himalayana
Solyc01g095640.2 Solanum lycopersicum
Solyc07g052490.4 Solanum lycopersicum
Solyc12g005795.1 Solanum lycopersicum
Sopen01g039390 Solanum pennellii
Sopen12g001750 Solanum pennellii
Sp1g00910 Schrenkiella parvula
Sp4g28430 Schrenkiella parvula
Sp6g01080 Schrenkiella parvula
Sp6g15380 Schrenkiella parvula
TAR626G1530 Trochodendron aralioides
TAR626G1685 Trochodendron aralioides
TAR629G1715 Trochodendron aralioides
THA.LOC104800287 Tarenaya hassleriana
THA.LOC104811933 Tarenaya hassleriana
THA.LOC104817050 Tarenaya hassleriana
THA.LOC104825134 Tarenaya hassleriana
THA.LOC104825874 Tarenaya hassleriana
THA.LOC104827629 Tarenaya hassleriana
Thecc.01G345200 Theobroma cacao
Thecc.02G312700 Theobroma cacao
Thecc.03G193400 Theobroma cacao
Thecc.03G295000 Theobroma cacao
Thecc.06G214500 Theobroma cacao
Thecc.06G220300 Theobroma cacao
Thecc.07G051100 Theobroma cacao
Thhalv10001695m.g Eutrema salsugineum
Thhalv10009233m.g Eutrema salsugineum
Thhalv10015741m.g Eutrema salsugineum
Thhalv10017480m.g Eutrema salsugineum
Thhalv10029104m.g Eutrema salsugineum
TPR.G19035 Trifolium pratense
TPR.G4203 Trifolium pratense
TPR.G6611 Trifolium pratense
TWI14G1015 Tripterygium wilfordii
TWI15G1123 Tripterygium wilfordii
TWI18G0553 Tripterygium wilfordii
TWI36G1458 Tripterygium wilfordii
TWI38G0250 Tripterygium wilfordii
TWI38G0688 Tripterygium wilfordii
TWI38G1835 Tripterygium wilfordii
TWI60G1384 Tripterygium wilfordii
TWI63G0794 Tripterygium wilfordii
TWI75G1246 Tripterygium wilfordii
unitig_699.g19175 Utricularia gibba
unitig_744.g24527 Utricularia gibba
unitig_899.g14806 Utricularia gibba
vmacro11760 Vaccinium macrocarpon
vmacro12223 Vaccinium macrocarpon
vmacro13176 Vaccinium macrocarpon
vmacro13903 Vaccinium macrocarpon
Zm00001eb159610 Zea mays

User provided reference genes

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