Gene: AT5G53200
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G53200
- Transcript Identifier AT5G53200.1
- Gene Type Coding gene
- Location Chr5 : 21582913-21583960 : positive
Gene Family Information
- ID HOM05D002680
- #Genes/#Species 257/73
- Phylogenetic origin
- ID ORTHO05D001151
- #Genes/#Species 474/87
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G53200.1
- symbol TRY
- full_name TRIPTYCHON
- uniprot Q8GV05
Descriptions
- Description Homeodomain-like superfamily protein
- Computational description TRIPTYCHON (TRY); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G30420.1); Has 2274 Blast hits to 2274 proteins in 174 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 2256; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010091 | IMP | Gene Ontology | trichome branching | 1 |
| GO:0006355 | TAS | Gene Ontology | regulation of transcription, DNA-templated | 2 |
| GO:1900032 | IMP | Gene Ontology | regulation of trichome patterning | 3 |
| GO:0010154 | IMP | Gene Ontology | fruit development | 4 |
| GO:0030154 | IBA | Gene Ontology | cell differentiation | 5 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 2 |
| GO:0000976 | IPI IBA | Gene Ontology | transcription cis-regulatory region binding | 5 6 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 7 |
| GO:0003677 | IEA | GOA Database | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM, IBA | Gene Ontology | nucleus | 5 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.2.2 | RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB-related) |