Gene: AT4G01060

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G01060
  • Transcript Identifier AT4G01060.3
  • Gene Type Coding gene
  • Location Chr4 : 460534-460967 : positive

Gene Family Information

  • ID HOM05D000008
  • #Genes/#Species 9932/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G01060.3
  • symbol CPL3
  • Alias ETC3,ENHANCER OF TRY AND CPC 3
  • uniprot Q9M157

Descriptions

  • Description CAPRICE-like MYB3
  • Computational description CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 2727 Blast hits to 2727 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2715; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
  • Computational description CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010026
IMP
Gene Ontologytrichome differentiation1
GO:0010228
IMP
Gene Ontologyvegetative to reproductive phase transition of meristem1
GO:0048765
IMP
Gene Ontologyroot hair cell differentiation1
GO:0030154
IBA
Gene Ontologycell differentiation2
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity3
GO:0000976
IBA
Gene Ontologytranscription cis-regulatory region binding2
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2
GO:0005886
ISM
Gene Ontologyplasma membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017930 Myb domain
IPR001005 SANT/Myb domain
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.2.2 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB-related)