Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p12030 Brassica napus
Aa31LG7G9960 Aethionema arabicum
Actinidia18866 Actinidia chinensis
Actinidia35156 Actinidia chinensis
Ah.02g121270 Amaranthus hybridus
AL1G40630 Arabidopsis lyrata
Aqoxy1G02492 Aquilegia oxysepala
Aqoxy7G03560 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3RSR9Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EIVX2Z Arachis hypogaea
AT1G24290 Arabidopsis thaliana
ATR0763G192 Amborella trichopoda
Atru.chr8.1035 Acer truncatum
AUR62003549 Chenopodium quinoa
AUR62017863 Chenopodium quinoa
BcaB03g13997 Brassica carinata
BcaC06g35275 Brassica carinata
BolC7t42303H Brassica oleracea
BraA07t28989Z Brassica rapa
C07p17970 Brassica napus
CAN.G843.21 Capsicum annuum
CARHR026810 Cardamine hirsuta
Carub.0001s2577 Capsella rubella
Ca_06492_v3 Cicer arietinum L.
Ca_28576_v3 Cicer arietinum L.
Cc11_g00270 Coffea canephora
CDE02G0076 Ceratophyllum demersum
Cfa016256 Carpinus fangiana
Cfa024934 Carpinus fangiana
Ciclev10011398m.g Citrus clementina
CiPaw.05G264600 Carya illinoinensis
ClCG07G011010 Citrullus lanatus
COL.COLO4_20003 Corchorus olitorius
Cpa.g.sc332.3 Carica papaya
CsaV3_4G007230 Cucumis sativus L.
CsaV3_4G007240 Cucumis sativus L.
DCAR_005902 Daucus carota
Dinv35124 Davidia involucrata
ECA234G0414 Erigeron canadensis
EL10Ac6g15329 Beta vulgaris
Eucgr.A00951 Eucalyptus grandis
Eucgr.F00067 Eucalyptus grandis
FAN04G0802 Fragaria x ananassa
FAN08G0714 Fragaria x ananassa
FAN18G1087 Fragaria x ananassa
FvH4_5g33930 Fragaria vesca
Glyma.14G003100 Glycine max
Gohir.A08G050700 Gossypium hirsutum
Gohir.D08G060500 Gossypium hirsutum
Gorai.004G062600 Gossypium raimondii
GSVIVG01015905001 Vitis vinifera
HanXRQChr11g0342451 Helianthus annuus
Haze_00006 Corylus avellana
Haze_26752 Corylus avellana
Hma1.2p1_0391F.1_g142860 Hydrangea macrophylla
HPP92_016337 Vanilla planifolia
HPP92_016414 Vanilla planifolia
Lalb_Chr10g0101591 Lupinus albus
Lj1A623T74 Lonicera japonica
Lj1C622G7 Lonicera japonica
LjContig00081g0000792 Lotus japonicus
Lsat_1_v5_gn_1_40040 Lactuca sativa
Manes.16G000700 Manihot esculenta
Mapoly0100s0005 Marchantia polymorpha
MBI18_g18636_MAGBIO Magnolia biondii
MD03G1299000 Malus domestica
MD11G1318300 Malus domestica
MD11G1318400 Malus domestica
Medtr5g098850 Medicago truncatula
Medtr6g036640 Medicago truncatula
Migut.M00128 Erythranthe guttata
Nitab4.5_0000660g0010 Nicotiana tabacum
Nitab4.5_0000663g0200 Nicotiana tabacum
Nitab4.5_0000843g0040 Nicotiana tabacum
Nitab4.5_0002450g0010 Nicotiana tabacum
Nitab4.5_0004302g0010 Nicotiana tabacum
Nn1g06845 Nelumbo nucifera
Nn7g38387 Nelumbo nucifera
Oeu061991.1 Olea europaea
Peaxi162Scf00314g00515 Petunia axillaris
PGR031G2089 Punica granatum
PGSC0003DMG400014180 Solanum tuberosum
PGSC0003DMG400021041 Solanum tuberosum
Phvul.008G290000 Phaseolus vulgaris
Potri.011G023800 Populus trichocarpa
Pp3c23_21270 Physcomitrium patens
Pp3c24_11680 Physcomitrium patens
Pp3c7_25960 Physcomitrium patens
Pp3s356_30 Physcomitrium patens
Psat2g001680 Pisum sativum
PSO677G0001 Papaver somniferum
QL04p064712 Quercus lobata
QL04p064780 Quercus lobata
RcHm_v2.0_Chr7g0233321 Rosa chinensis
Rhsim02G0171800 Rhododendron simsii
Sabra11G0014800 Salix brachista
SalBow7G2824 Salvia bowleyana
SalBow7G3142 Salvia bowleyana
Sc07g0001890 Simmondsia chinensis
Sed0000140 Sechium edule
SEGI_03426 Sequoiadendron giganteum
SEGI_30607 Sequoiadendron giganteum
SGA_v2.0_scaffold73G24408 Striga asiatica
SHI28197 Sapria himalayana
SMO116G0181 Selaginella moellendorffii
Solyc03g118320.1 Solanum lycopersicum
Sopen03g037220 Solanum pennellii
Sp1g23470 Schrenkiella parvula
TAR464G0001 Trochodendron aralioides
THA.LOC104827506 Tarenaya hassleriana
Thecc.01G176000 Theobroma cacao
Thhalv10009719m.g Eutrema salsugineum
TPR.G35899 Trifolium pratense
unitig_699.g19570 Utricularia gibba
vmacro11021 Vaccinium macrocarpon

User provided reference genes

Program Settings