Gene: Sopen03g037220

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g037220
  • Transcript Identifier Sopen03g037220.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 71788467-71790218 : positive

Gene Family Information

  • ID HOM05D006964
  • #Genes/#Species 115/84
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g037220.1

Descriptions

  • Description AAA-type ATPase family protein | FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding | EXPRESSED IN: shoot apex, seed | EXPRESSED DURING: E expanded cotyledon stage | CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core , Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote , Ubiquitin-associated/translation elongation factor EF1B, N-terminal , ATPase, AAA-type, core , MgsA AAA ATPase C-terminal , UBA-like | BEST Arabidopsis thaliana protein match is: replication factor C subunit 3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
IEA
InterProDNA replication

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009060 UBA-like superfamily
IPR015940 Ubiquitin-associated domain
IPR032423 AAA C-terminal domain
IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
IPR021886 MgsA AAA+ ATPase C-terminal
IPR003593 AAA+ ATPase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003959 ATPase, AAA-type, core
Mapman id Description
35.1 not assigned.annotated