Gene: AT1G24290

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G24290
  • Transcript Identifier AT1G24290.1
  • Gene Type Coding gene
  • Location Chr1 : 8612650-8614227 : negative

Gene Family Information

  • ID HOM05D006964
  • #Genes/#Species 115/84
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G24290.1
  • uniprot O48696

Descriptions

  • Description AAA-type ATPase family protein
  • Computational description AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; EXPRESSED IN: shoot apex, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), ATPase, AAA-type, core (InterPro:IPR003959), MgsA AAA ATPase C-terminal (InterPro:IPR021886), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: replication factor C subunit 3 (TAIR:AT1G77470.1); Has 22422 Blast hits to 22383 proteins in 2992 species: Archae - 614; Bacteria - 15728; Metazoa - 553; Fungi - 700; Plants - 273; Viruses - 62; Other Eukaryotes - 4492 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006261
IBA
Gene OntologyDNA-dependent DNA replication1
GO:0006282
IBA
Gene Ontologyregulation of DNA repair1
GO:0032508
IEA
GOA DatabaseDNA duplex unwinding
GO:0050790
IEA
GOA Databaseregulation of catalytic activity
GO:0006260
IEA
GOA DatabaseDNA replication
GO:0006260
IEA
InterProDNA replication

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
Gene OntologyDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
Gene OntologyATP binding
GO:0005524
IEA
InterProATP binding
GO:0017116
IBA
Gene Ontologysingle-stranded DNA helicase activity1
GO:0008047
IBA
Gene Ontologyenzyme activator activity1
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032423 AAA C-terminal domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
IPR015940 Ubiquitin-associated domain
IPR003959 ATPase, AAA-type, core
IPR009060 UBA-like superfamily
IPR003593 AAA+ ATPase domain
IPR021886 MgsA AAA+ ATPase C-terminal
Mapman id Description
35.1 not assigned.annotated