Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p27360 Brassica napus
Aa31LG4G16540 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis
Actinidia05109 Actinidia chinensis
Actinidia09914 Actinidia chinensis
Ah.06g195870 Amaranthus hybridus
AL5G27200 Arabidopsis lyrata
Aqoxy1G03627 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea
AT3G47860 Arabidopsis thaliana
ATR0752G046 Amborella trichopoda
Atru.BG.12.p Acer truncatum
Atru.chr2.3275 Acer truncatum
AUR62000376 Chenopodium quinoa
AUR62006731 Chenopodium quinoa
BcaB02g10686 Brassica carinata
BcaC01g02294 Brassica carinata
BolC3t18966H Brassica oleracea
BraA06t25672Z Brassica rapa
C03p66930 Brassica napus
CAN.G315.6 Capsicum annuum
CANSAT25G1970 Cannabis sativa
CARHR156600 Cardamine hirsuta
Carub.0005s1401 Capsella rubella
Ca_06305_v3 Cicer arietinum L.
CBR_g57971 Chara braunii
Cc05_g13490 Coffea canephora
CDE01G0156 Ceratophyllum demersum
Ciclev10008835m.g Citrus clementina
CiPaw.11G186900 Carya illinoinensis
ClCG05G014460 Citrullus lanatus
COL.COLO4_09629 Corchorus olitorius
Cpa.g.sc97.37 Carica papaya
CsaV3_3G023260 Cucumis sativus L.
CSS0009238 Camellia sinensis var. sinensis
DCAR_022551 Daucus carota
Dinv22282 Davidia involucrata
Duzib213G0630 Durio zibethinus
ECA236G4406 Erigeron canadensis
EL10Ac4g09438 Beta vulgaris
Eucgr.F03445 Eucalyptus grandis
FAN11G0521 Fragaria x ananassa
FAN16G0093 Fragaria x ananassa
FAN25G3657 Fragaria x ananassa
FvH4_3g22121 Fragaria vesca
Glyma.02G289400 Glycine max
Glyma.14G025600 Glycine max
Glyma.14G153300 Glycine max
Gohir.A01G077200 Gossypium hirsutum
Gohir.D01G064700 Gossypium hirsutum
Gorai.002G085600 Gossypium raimondii
GSVIVG01001999001 Vitis vinifera
HanXRQChr15g0494291 Helianthus annuus
Haze_09645 Corylus avellana
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla
HPP92_009349 Vanilla planifolia
Hund07318 Selenicereus undatus
Lalb_Chr04g0248591 Lupinus albus
Lj8A167T47 Lonicera japonica
LjContig00308g0005180 Lotus japonicus
Lsat_1_v5_gn_7_109080 Lactuca sativa
Manes.15G074101 Manihot esculenta
Mapoly0115s0028 Marchantia polymorpha
MBI18_g06645_MAGBIO Magnolia biondii
MD03G1208100 Malus domestica
MD11G1222300 Malus domestica
Medtr5g092080 Medicago truncatula
MELO3C018077.2 Cucumis melo
Migut.M01786 Erythranthe guttata
MSTRG.6906 Avicennia marina
Nitab4.5_0000653g0090 Nicotiana tabacum
Nitab4.5_0000749g0100 Nicotiana tabacum
Nn1g07100 Nelumbo nucifera
Oeu005459.1 Olea europaea
Os04g0626400 Oryza sativa ssp. japonica
Peaxi162Scf01097g00023 Petunia axillaris
PGR031G1507 Punica granatum
PGSC0003DMG400001099 Solanum tuberosum
Phvul.008G265400 Phaseolus vulgaris
Potri.001G420800 Populus trichocarpa
Pp3c9_6110 Physcomitrium patens
PRCOL_00005879 Prasinoderma coloniale
Prupe.4G208600 Prunus persica
Psat2g015280 Pisum sativum
PSO210G7832 Papaver somniferum
PSO832G0412 Papaver somniferum
QL08p011921 Quercus lobata
QL08p012092 Quercus lobata
QL08p012107 Quercus lobata
RcHm_v2.0_Chr3g0496801 Rosa chinensis
RcHm_v2.0_Chr5g0037981 Rosa chinensis
Rhsim06G0214800 Rhododendron simsii
Sabra16G0285700 Salix brachista
Sc06g0005170 Simmondsia chinensis
Sed0001393 Sechium edule
Sed0006226 Sechium edule
SEGI_26249 Sequoiadendron giganteum
SEGI_29406 Sequoiadendron giganteum
SGA_v2.0_scaffold3389G54328 Striga asiatica
SGA_v2.0_scaffold80G25946 Striga asiatica
SMO147G0254 Selaginella moellendorffii
Solyc12g005180.2 Solanum lycopersicum
Sopen12g001170 Solanum pennellii
Sp5g14080 Schrenkiella parvula
SpUn0103_0020 Schrenkiella parvula
TAR627G0163 Trochodendron aralioides
Thecc.07G044200 Theobroma cacao
Thhalv10010497m.g Eutrema salsugineum
TPR.G12727 Trifolium pratense
TPR.G29121 Trifolium pratense
TPR.G29124 Trifolium pratense
TWI39G0401 Tripterygium wilfordii
unitig_62.g23277 Utricularia gibba
vmacro11742 Vaccinium macrocarpon
VMungo0647G1753 Vigna mungo
Zm00001eb070100 Zea mays

User provided reference genes

Program Settings