Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p51470 Brassica napus
Aa31LG10G13530 Aethionema arabicum
Actinidia39996 Actinidia chinensis
Ah.07g198470 Amaranthus hybridus
Ah.07g201920 Amaranthus hybridus
Ah.07g201930 Amaranthus hybridus
AL5G40920 Arabidopsis lyrata
Aqoxy5G04293 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.T7AVMG Arachis hypogaea
AT3G59040 Arabidopsis thaliana
ATR1098G151 Amborella trichopoda
Atru.chr6.2750 Acer truncatum
AUR62002293 Chenopodium quinoa
AUR62015397 Chenopodium quinoa
BcaB02g07488 Brassica carinata
BcaC07g40235 Brassica carinata
BcaC07g40237 Brassica carinata
BcaC07g40308 Brassica carinata
BcaC08g44952 Brassica carinata
BcaC08g44954 Brassica carinata
BcaC08g44955 Brassica carinata
BolC6t37747H Brassica oleracea
BolC8t51020H Brassica oleracea
BraA09t40583Z Brassica rapa
C08p34230 Brassica napus
CAN.G819.5 Capsicum annuum
CANSAT64G1219 Cannabis sativa
CARHR169450 Cardamine hirsuta
Carub.0005s2580 Capsella rubella
Ca_11227_v3 Cicer arietinum L.
Cc05_g00360 Coffea canephora
CDE05G1065 Ceratophyllum demersum
Cfa023538 Carpinus fangiana
Ciclev10014674m.g Citrus clementina
CiPaw.03G197600 Carya illinoinensis
ClCG11G016650 Citrullus lanatus
COL.COLO4_29911 Corchorus olitorius
Cpa.g.sc50.124 Carica papaya
CsaV3_4G032160 Cucumis sativus L.
CSS0001521 Camellia sinensis var. sinensis
CSS0049788 Camellia sinensis var. sinensis
DCAR_023000 Daucus carota
Dinv09723 Davidia involucrata
Duzib147G0394 Durio zibethinus
ECA248G0755 Erigeron canadensis
EL10Ac5g11659 Beta vulgaris
EL10Ac5g11660 Beta vulgaris
EL10Ac8g19571 Beta vulgaris
Eucgr.K01239 Eucalyptus grandis
FAN02G0564 Fragaria x ananassa
FAN05G5081 Fragaria x ananassa
FAN09G4833 Fragaria x ananassa
FAN12G2047 Fragaria x ananassa
FAN14G1916 Fragaria x ananassa
FvH4_6g38970 Fragaria vesca
Glyma.10G285200 Glycine max
Glyma.20G103800 Glycine max
Gohir.A05G380400 Gossypium hirsutum
Gohir.D04G035200 Gossypium hirsutum
Gorai.012G039700 Gossypium raimondii
GSVIVG01020809001 Vitis vinifera
HanXRQChr01g0029361 Helianthus annuus
Haze_13626 Corylus avellana
Hma1.2p1_0073F.1_g038540 Hydrangea macrophylla
HPP92_011054 Vanilla planifolia
HPP92_011074 Vanilla planifolia
Hund08483 Selenicereus undatus
Lalb_Chr06g0163881 Lupinus albus
Lj1A585G40 Lonicera japonica
Lj1A585G41 Lonicera japonica
Lj5g0013784 Lotus japonicus
Lj5g0013792 Lotus japonicus
Lsat_1_v5_gn_1_49160 Lactuca sativa
Manes.09G006600 Manihot esculenta
Mapoly0047s0104 Marchantia polymorpha
MBI02_g40094_MAGBIO Magnolia biondii
MBI02_g40097_MAGBIO Magnolia biondii
MD09G1145700 Malus domestica
MD17G1132200 Malus domestica
Medtr1g114300 Medicago truncatula
MELO3C026387.2 Cucumis melo
Migut.M00108 Erythranthe guttata
MSTRG.6613 Avicennia marina
Nitab4.5_0001843g0110 Nicotiana tabacum
Nitab4.5_0007665g0020 Nicotiana tabacum
Nn4g26620 Nelumbo nucifera
Nn4g26621 Nelumbo nucifera
Oeu051395.1 Olea europaea
Os08g0191900 Oryza sativa ssp. japonica
PGR142G3441 Punica granatum
PGSC0003DMG400015924 Solanum tuberosum
Phvul.007G015300 Phaseolus vulgaris
Potri.001G220300 Populus trichocarpa
Pp3c26_11100 Physcomitrium patens
Prupe.3G180100 Prunus persica
Psat6g233520 Pisum sativum
PSO541G5267 Papaver somniferum
PSO675G5462 Papaver somniferum
QL02p091883 Quercus lobata
QL93p2017_0027 Quercus lobata
RcHm_v2.0_Chr2g0152561 Rosa chinensis
Rhsim05G0172300 Rhododendron simsii
Sabra16G0124100 Salix brachista
Sc14g0005210 Simmondsia chinensis
Sc14g0005250 Simmondsia chinensis
Sed0004539 Sechium edule
SEGI_19840 Sequoiadendron giganteum
SGA_v2.0_scaffold73G24452 Striga asiatica
SMO259G0047 Selaginella moellendorffii
Solyc07g043600.4 Solanum lycopersicum
Sopen07g023170 Solanum pennellii
Sp5g03940 Schrenkiella parvula
TAR624G0481 Trochodendron aralioides
THA.LOC104802288 Tarenaya hassleriana
Thecc.01G164600 Theobroma cacao
Thhalv10005856m.g Eutrema salsugineum
TPR.G4069 Trifolium pratense
TWI23G0590 Tripterygium wilfordii
unitig_899.g15288 Utricularia gibba
vmacro19989 Vaccinium macrocarpon
Zm00001eb413390 Zea mays

User provided reference genes

Program Settings