Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p25610 Brassica napus
Aa31LG4G17110 Aethionema arabicum
Actinidia08858 Actinidia chinensis
Actinidia36794 Actinidia chinensis
Ah.02g115320 Amaranthus hybridus
AL5G27930 Arabidopsis lyrata
Aqoxy5G03523 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea
AT3G48500 Arabidopsis thaliana
ATR0060G001 Amborella trichopoda
ATR0686G112 Amborella trichopoda
Atru.chr9.1023 Acer truncatum
AUR62025863 Chenopodium quinoa
AUR62029828 Chenopodium quinoa
BcaB05g23014 Brassica carinata
BcaC09g49867 Brassica carinata
BolC1t03137H Brassica oleracea
BraA01t02452Z Brassica rapa
C01p32170 Brassica napus
CAN.G352.47 Capsicum annuum
CANSAT80G0035 Cannabis sativa
CARHR157250 Cardamine hirsuta
Carub.0005s1468 Capsella rubella
Ca_15262_v3 Cicer arietinum L.
Ca_15265_v3 Cicer arietinum L.
CBR_g31403 Chara braunii
Cc04_g10160 Coffea canephora
CDE02G2664 Ceratophyllum demersum
CDE09G0508 Ceratophyllum demersum
Cfa018872 Carpinus fangiana
Ciclev10019152m.g Citrus clementina
CiPaw.12G036500 Carya illinoinensis
ClCG06G017720 Citrullus lanatus
COL.COLO4_16830 Corchorus olitorius
Cpa.g.sc4.99 Carica papaya
Cre07.g348500 Chlamydomonas reinhardtii
CsaV3_1G000740 Cucumis sativus L.
CSS0007976 Camellia sinensis var. sinensis
DCAR_007473 Daucus carota
Dinv04849 Davidia involucrata
Duzib205G1155 Durio zibethinus
ECA246G1540 Erigeron canadensis
EL10As4g23464 Beta vulgaris
Eucgr.B00143 Eucalyptus grandis
FAN04G1748 Fragaria x ananassa
FAN08G0518 Fragaria x ananassa
FAN13G0522 Fragaria x ananassa
FAN18G3475 Fragaria x ananassa
FAN21G1369 Fragaria x ananassa
FAN21G3066 Fragaria x ananassa
FAN25G1587 Fragaria x ananassa
FvH4_5g07670 Fragaria vesca
Glyma.04G193700 Glycine max
Glyma.06G172400 Glycine max
Gohir.A07G053200 Gossypium hirsutum
Gohir.D07G057600 Gossypium hirsutum
Gorai.001G061100 Gossypium raimondii
GSVIVG01008490001 Vitis vinifera
HanXRQChr05g0158451 Helianthus annuus
Haze_07256 Corylus avellana
HPP92_003572 Vanilla planifolia
HPP92_003575 Vanilla planifolia
Hund02417 Selenicereus undatus
Lalb_Chr11g0069681 Lupinus albus
Lj1g0010015 Lotus japonicus
Lj5A99T74 Lonicera japonica
Lsat_1_v5_gn_5_13320 Lactuca sativa
Manes.14G054400 Manihot esculenta
Mapoly0120s0021 Marchantia polymorpha
MBI08_g33782_MAGBIO Magnolia biondii
MCO14G318 Micromonas commoda
MD14G1162400 Malus domestica
Medtr3g075050 Medicago truncatula
MELO3C026221.2 Cucumis melo
Migut.I00491 Erythranthe guttata
Nitab4.5_0001664g0100 Nicotiana tabacum
Nitab4.5_0005327g0070 Nicotiana tabacum
Nn4g22414 Nelumbo nucifera
Oeu006374.4 Olea europaea
Os01g0901900 Oryza sativa ssp. japonica
Peaxi162Scf00089g00326 Petunia axillaris
PGR083G2113 Punica granatum
PGSC0003DMG400015251 Solanum tuberosum
Phvul.009G168200 Phaseolus vulgaris
Potri.015G091700 Populus trichocarpa
Pp3c18_13570 Physcomitrium patens
Prupe.5G155500 Prunus persica
Psat5g140160 Pisum sativum
PSO063G3222 Papaver somniferum
PSO782G1921 Papaver somniferum
QL10p004744 Quercus lobata
RcHm_v2.0_Chr1g0380361 Rosa chinensis
RcHm_v2.0_Chr1g0380381 Rosa chinensis
RcHm_v2.0_Chr7g0190801 Rosa chinensis
Rhsim12G0172500 Rhododendron simsii
Sabra15G0113500 Salix brachista
SalBow5G0933 Salvia bowleyana
SalBow5G1883 Salvia bowleyana
Sc22g0004160 Simmondsia chinensis
Sed0022036 Sechium edule
SEGI_14596 Sequoiadendron giganteum
SEGI_40144 Sequoiadendron giganteum
SGA_v2.0_scaffold161G37820 Striga asiatica
SMO356G0597 Selaginella moellendorffii
Solyc03g111050.3 Solanum lycopersicum
Sopen03g030220 Solanum pennellii
Sp5g13530 Schrenkiella parvula
TAR622G1334 Trochodendron aralioides
THA.LOC104798952 Tarenaya hassleriana
Thecc.03G124600 Theobroma cacao
Thhalv10010171m.g Eutrema salsugineum
TPR.G22596 Trifolium pratense
TPR.G26148 Trifolium pratense
TWI23G0930 Tripterygium wilfordii
unitig_0.g1069 Utricularia gibba
unitig_0.g1070 Utricularia gibba
vmacro16654 Vaccinium macrocarpon
vmacro16714 Vaccinium macrocarpon
Zm00001eb365570 Zea mays

User provided reference genes

Program Settings