Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p08080 Brassica napus
Aa31LG11G590 Aethionema arabicum
Aa31LG11G600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3069 Anthoceros agrestis
Actinidia19342 Actinidia chinensis
Ah.02g110650 Amaranthus hybridus
AL8G40110 Arabidopsis lyrata
Aqoxy1G03747 Aquilegia oxysepala
Aqoxy3G02831 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1D5X8L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BDIM58 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DN8DE7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y9SFAP Arachis hypogaea
AT5G63080 Arabidopsis thaliana
ATR1152G085 Amborella trichopoda
Atru.chr9.2534_Atru.chr9.2535 Acer truncatum
AUR62008177 Chenopodium quinoa
AUR62028758 Chenopodium quinoa
BcaB04g19943 Brassica carinata
BcaC04g23364 Brassica carinata
BolC9t53826H Brassica oleracea
BraA09t36459Z Brassica rapa
C09p09140 Brassica napus
CAN.G1166.29 Capsicum annuum
CANSAT64G0258 Cannabis sativa
CARHR276890 Cardamine hirsuta
Carub.0008s2381 Capsella rubella
Ca_16153_v3 Cicer arietinum L.
CBR_g49886 Chara braunii
Cc04_g12530 Coffea canephora
CDE04G2890 Ceratophyllum demersum
Cfa019173 Carpinus fangiana
Ciclev10019926m.g Citrus clementina
CiPaw.11G023000 Carya illinoinensis
ClCG06G017160 Citrullus lanatus
COL.COLO4_30118 Corchorus olitorius
Cpa.g.sc153.11 Carica papaya
Cpa.g.sc153.14 Carica papaya
Cpa.g.sc153.15 Carica papaya
Cre03.g177007 Chlamydomonas reinhardtii
CsaV3_1G001320 Cucumis sativus L.
CSS0037952 Camellia sinensis var. sinensis
DCAR_016036 Daucus carota
Dinv20623 Davidia involucrata
Dinv20624 Davidia involucrata
Duzib205G0761 Durio zibethinus
ECA232G2495 Erigeron canadensis
EL10Ac5g10701 Beta vulgaris
Eucgr.B00243 Eucalyptus grandis
FAN04G1931 Fragaria x ananassa
FAN08G2490 Fragaria x ananassa
FAN13G1600 Fragaria x ananassa
FAN18G2086 Fragaria x ananassa
FvH4_5g05750 Fragaria vesca
Glyma.04G185900 Glycine max
Glyma.06G180100 Glycine max
Glyma.06G180200 Glycine max
Gohir.A12G272800 Gossypium hirsutum
Gohir.D12G273500 Gossypium hirsutum
Gorai.008G293900 Gossypium raimondii
GSVIVG01007692001 Vitis vinifera
HanXRQChr11g0348321 Helianthus annuus
Haze_07550 Corylus avellana
HPP92_023397 Vanilla planifolia
Hund09455 Selenicereus undatus
Lalb_Chr11g0070371 Lupinus albus
Lalb_Chr11g0070381 Lupinus albus
Lj1g0001085 Lotus japonicus
Lj9C445T6 Lonicera japonica
Lsat_1_v5_gn_4_75921 Lactuca sativa
Manes.14G062950 Manihot esculenta
Mapoly0108s0029 Marchantia polymorpha
MBI16_g14603_MAGBIO Magnolia biondii
MBI16_g23863_MAGBIO Magnolia biondii
MCO16G527 Micromonas commoda
MD14G1089700 Malus domestica
MD14G1175900 Malus domestica
Medtr3g077420 Medicago truncatula
MELO3C026280.2 Cucumis melo
Migut.O00130 Erythranthe guttata
MSTRG.23151 Avicennia marina
Nitab4.5_0001284g0040 Nicotiana tabacum
Nitab4.5_0006452g0010 Nicotiana tabacum
Nn4g22672 Nelumbo nucifera
Oeu036011.1 Olea europaea
Os01g0546900 Oryza sativa ssp. japonica
Peaxi162Scf00089g01633 Petunia axillaris
PGR083G0458 Punica granatum
PGSC0003DMG400018168 Solanum tuberosum
Phvul.009G175900 Phaseolus vulgaris
Potri.015G080400 Populus trichocarpa
PRCOL_00001780 Prasinoderma coloniale
Prupe.5G169900 Prunus persica
Psat5g115280 Pisum sativum
PSO063G4773 Papaver somniferum
PSO832G2003 Papaver somniferum
QL10p008791 Quercus lobata
RcHm_v2.0_Chr7g0193061 Rosa chinensis
Rhsim08G0174900 Rhododendron simsii
Sabra15G0072500 Salix brachista
Sabra15G0104600 Salix brachista
SalBow5G1232 Salvia bowleyana
SalBow5G1744 Salvia bowleyana
Sc10g0010150 Simmondsia chinensis
Sed0000603 Sechium edule
SEGI_41391 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10812 Striga asiatica
SHI17138 Sapria himalayana
SMO141G0010 Selaginella moellendorffii
Solyc03g112600.4 Solanum lycopersicum
Sopen03g031690 Solanum pennellii
Sp2g26210 Schrenkiella parvula
TAR371G0860 Trochodendron aralioides
THA.LOC104821484 Tarenaya hassleriana
Thecc.03G019600 Theobroma cacao
Thecc.03G024500 Theobroma cacao
Thhalv10004134m.g Eutrema salsugineum
TPR.G28722 Trifolium pratense
unitig_22.g6289 Utricularia gibba
vmacro19416 Vaccinium macrocarpon
VMungo1309G1735 Vigna mungo
Zm00001eb342240 Zea mays

User provided reference genes

Program Settings