Gene: HPP92_023397
General Information
Structural Information
- Species Vanilla planifolia
- Gene Identifier HPP92_023397
- Transcript Identifier Vpl12Ag23397.1
- Gene Type Coding gene
- Location CM028161.1 : 35558429-35578320 : negative
Gene Family Information
- ID HOM05D006586
- #Genes/#Species 122/97
- Phylogenetic origin
- ID ORTHO05D008254
- #Genes/#Species 121/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Vpl12Ag23397.1
- pid KAG0458240.1
Descriptions
- Description JmjC domain-containing protein 4 ***
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010030 | ISO | PLAZA Integrative Orthology | positive regulation of seed germination | AT5G63080 |
| GO:0043985 | ISO | PLAZA Integrative Orthology | histone H4-R3 methylation | AT5G63080 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0033749 | ISO | PLAZA Integrative Orthology | histone demethylase activity (H4-R3 specific) | AT5G63080 |
| GO:0000987 | ISO | PLAZA Integrative Orthology | cis-regulatory region sequence-specific DNA binding | AT5G63080 |
| GO:0033746 | ISO | PLAZA Integrative Orthology | histone demethylase activity (H3-R2 specific) | AT5G63080 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G63080 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003347 | JmjC domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |