Gene: Os01g0546900
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os01g0546900
- Transcript Identifier Os01t0546900-01
- Gene Type Coding gene
- Location chr01 : 20322699-20326282 : positive
Gene Family Information
- ID HOM05D006586
- #Genes/#Species 122/97
- Phylogenetic origin
- ID ORTHO05D008254
- #Genes/#Species 121/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Os01t0546900-01
- MSU-ID LOC_Os01g36630.1
- uniprot Q5JKD1
Descriptions
- Description Similar to transcription factor jumonji (jmjC) domain-containing protein.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010030 | ISO | PLAZA Integrative Orthology | positive regulation of seed germination | AT5G63080 |
| GO:0043985 | ISO | PLAZA Integrative Orthology | histone H4-R3 methylation | AT5G63080 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0033749 | ISO | PLAZA Integrative Orthology | histone demethylase activity (H4-R3 specific) | AT5G63080 |
| GO:0000987 | ISO | PLAZA Integrative Orthology | cis-regulatory region sequence-specific DNA binding | AT5G63080 |
| GO:0033746 | ISO | PLAZA Integrative Orthology | histone demethylase activity (H3-R2 specific) | AT5G63080 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G63080 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003347 | JmjC domain |
| Mapman id | Description |
|---|---|
| 12.3.3.8.7 | Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM11) |