Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p37110 Brassica napus
Aa31LG11G9750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis
Actinidia35534 Actinidia chinensis
Actinidia35535 Actinidia chinensis
AL6G38850 Arabidopsis lyrata
Aqoxy2G02847 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea
AT5G26940 Arabidopsis thaliana
ATR0706G081 Amborella trichopoda
Atru.chr2.132 Acer truncatum
Atru.chr4.2940 Acer truncatum
AUR62000705 Chenopodium quinoa
AUR62005256 Chenopodium quinoa
BolC7t44660H Brassica oleracea
BraA06t26637Z Brassica rapa
C07p41320 Brassica napus
CAN.G1273.16 Capsicum annuum
CANSAT54G2069 Cannabis sativa
CARHR186630 Cardamine hirsuta
Carub.0006s2458 Capsella rubella
Ca_09322_v3 Cicer arietinum L.
Cc10_g14110 Coffea canephora
CDE02G1332 Ceratophyllum demersum
CDE09G1197 Ceratophyllum demersum
Ciclev10001747m.g Citrus clementina
Ciclev10005435m.g Citrus clementina
CiPaw.07G026800 Carya illinoinensis
ClCG03G017520 Citrullus lanatus
COL.COLO4_04127 Corchorus olitorius
Cpa.g.sc48.132 Carica papaya
CsaV3_1G038500 Cucumis sativus L.
CSS0047685 Camellia sinensis var. sinensis
DCAR_025267 Daucus carota
Dinv30860 Davidia involucrata
Duzib151G0636 Durio zibethinus
ECA236G3124 Erigeron canadensis
EL10Ac4g09387 Beta vulgaris
EL10Ac4g09842 Beta vulgaris
Eucgr.H03280 Eucalyptus grandis
FAN02G1429 Fragaria x ananassa
FAN05G1290 Fragaria x ananassa
FAN07G1328 Fragaria x ananassa
FAN09G3591 Fragaria x ananassa
FAN12G0061 Fragaria x ananassa
FAN12G3514 Fragaria x ananassa
FAN14G0724 Fragaria x ananassa
FvH4_4g19220 Fragaria vesca
FvH4_6g07110 Fragaria vesca
Glyma.03G233000 Glycine max
Glyma.10G148900 Glycine max
Glyma.19G230000 Glycine max
Gohir.A08G207200 Gossypium hirsutum
Gohir.D08G223800 Gossypium hirsutum
Gorai.004G237700 Gossypium raimondii
GSVIVG01031202001 Vitis vinifera
HanXRQChr15g0495151 Helianthus annuus
Haze_04092 Corylus avellana
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla
HPP92_011867 Vanilla planifolia
Hund21730 Selenicereus undatus
Hund21734 Selenicereus undatus
Lalb_Chr18g0045971 Lupinus albus
Lj1g0016861 Lotus japonicus
Lj5A342G70 Lonicera japonica
Lsat_1_v5_gn_7_73840 Lactuca sativa
Manes.09G174800 Manihot esculenta
Mapoly0162s0013 Marchantia polymorpha
MBI19_g14287_MAGBIO Magnolia biondii
MD12G1208900 Malus domestica
MD12G1209000 Malus domestica
MD13G1159900 Malus domestica
Medtr7g112320 Medicago truncatula
MELO3C015276.2 Cucumis melo
Migut.B00986 Erythranthe guttata
MSTRG.20391 Avicennia marina
Nitab4.5_0002715g0070 Nicotiana tabacum
Nitab4.5_0014337g0020 Nicotiana tabacum
Nn1g01031 Nelumbo nucifera
Nn3g21596 Nelumbo nucifera
Nn4g25689 Nelumbo nucifera
Oeu028007.2 Olea europaea
Oeu045894.1 Olea europaea
Os03g0301400 Oryza sativa ssp. japonica
Os04g0623400 Oryza sativa ssp. japonica
Peaxi162Scf00073g00128 Petunia axillaris
PGR031G3221 Punica granatum
PGSC0003DMG400024779 Solanum tuberosum
Phvul.001G226600 Phaseolus vulgaris
Phvul.007G199800 Phaseolus vulgaris
Potri.005G020600 Populus trichocarpa
Prupe.1G126500 Prunus persica
Prupe.6G316100 Prunus persica
Psat3g013840 Pisum sativum
PSO170G3086 Papaver somniferum
PSO357G0038 Papaver somniferum
QL03p017976 Quercus lobata
RcHm_v2.0_Chr3g0456691 Rosa chinensis
RcHm_v2.0_Chr4g0424201 Rosa chinensis
Rhsim11G0093000 Rhododendron simsii
Sabra05G0026600 Salix brachista
SalBow7G4019 Salvia bowleyana
Sc16g0008870 Simmondsia chinensis
Sed0009356 Sechium edule
SEGI_10576 Sequoiadendron giganteum
SEGI_25648 Sequoiadendron giganteum
SGA_v2.0_scaffold4G01962 Striga asiatica
SMO116G0265 Selaginella moellendorffii
Sopen01g043670 Solanum pennellii
Sp2g21090 Schrenkiella parvula
TAR362G0047 Trochodendron aralioides
TAR365G0240 Trochodendron aralioides
THA.LOC104818740 Tarenaya hassleriana
Thecc.04G293900 Theobroma cacao
Thecc.05G319500 Theobroma cacao
Thhalv10004624m.g Eutrema salsugineum
TPR.G1652 Trifolium pratense
TWI56G1276 Tripterygium wilfordii
unitig_46.g18373 Utricularia gibba
vmacro01541 Vaccinium macrocarpon
VMungo0720G1741 Vigna mungo
VMungo1383G3166 Vigna mungo
Zm00001eb014130 Zea mays

User provided reference genes

Program Settings