Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG1G3790 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5822 Anthoceros agrestis
Actinidia08069 Actinidia chinensis
Actinidia30647 Actinidia chinensis
AL1G22970 Arabidopsis lyrata
Aqoxy5G03367 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DXN1WG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P16M7J Arachis hypogaea
AT1G11780 Arabidopsis thaliana
ATR0561G191 Amborella trichopoda
Atru.chr11.2327 Acer truncatum
AUR62005622 Chenopodium quinoa
AUR62028926 Chenopodium quinoa
BcaB08g37422 Brassica carinata
BcaC07g41759 Brassica carinata
BcaC07g41777 Brassica carinata
BcaC07g41778 Brassica carinata
BolC8t52235H Brassica oleracea
BolC8t52335H Brassica oleracea
BolC8t52352H Brassica oleracea
BraA09t41778Z Brassica rapa
C08p46980 Brassica napus
C08p47970 Brassica napus
C08p48190 Brassica napus
CAN.G237.4 Capsicum annuum
CANSAT01G1158 Cannabis sativa
CARHR012120 Cardamine hirsuta
Carub.0001s1145 Capsella rubella
Ca_16457_v3 Cicer arietinum L.
CBR_g32330 Chara braunii
Cc11_g16930 Coffea canephora
CDE05G3615 Ceratophyllum demersum
Cfa001627 Carpinus fangiana
Cfa009372 Carpinus fangiana
Ciclev10031911m.g Citrus clementina
CiPaw.05G109500 Carya illinoinensis
ClCG11G013630 Citrullus lanatus
ClCG11G013640 Citrullus lanatus
COL.COLO4_20406 Corchorus olitorius
Cpa.g.sc43.60 Carica papaya
Cre06.g278198 Chlamydomonas reinhardtii
CsaV3_5G030250 Cucumis sativus L.
CSS0008831 Camellia sinensis var. sinensis
CSS0017614 Camellia sinensis var. sinensis
CSS0019305 Camellia sinensis var. sinensis
CSS0022605 Camellia sinensis var. sinensis
CSS0026603 Camellia sinensis var. sinensis
DCAR_031204 Daucus carota
DCAR_031205 Daucus carota
Dinv17565 Davidia involucrata
Duzib248G1079 Durio zibethinus
ECA233G2512 Erigeron canadensis
EL10Ac6g13506 Beta vulgaris
Eucgr.H04637 Eucalyptus grandis
FAN07G1264 Fragaria x ananassa
FAN12G3107 Fragaria x ananassa
FAN17G1989 Fragaria x ananassa
FAN22G2300 Fragaria x ananassa
FvH4_4g23730 Fragaria vesca
Glyma.11G250800 Glycine max
Glyma.18G006200 Glycine max
Gohir.A04G139700 Gossypium hirsutum
Gohir.D04G182900 Gossypium hirsutum
Gorai.012G175900 Gossypium raimondii
GSVIVG01010487001 Vitis vinifera
HanXRQChr08g0207841 Helianthus annuus
Haze_12422 Corylus avellana
Hma1.2p1_0065F.1_g035440 Hydrangea macrophylla
Hma1.2p1_0065F.1_g035450 Hydrangea macrophylla
Hund06091 Selenicereus undatus
Lalb_Chr11g0075761 Lupinus albus
Lj6C827T5 Lonicera japonica
Lj6g0022486 Lotus japonicus
Lsat_1_v5_gn_4_56020 Lactuca sativa
Manes.13G011800 Manihot esculenta
Mapoly0036s0054 Marchantia polymorpha
MBI11_g05329_MAGBIO Magnolia biondii
MCO14G547 Micromonas commoda
MD13G1119500 Malus domestica
Medtr3g085290 Medicago truncatula
MELO3C011863.2 Cucumis melo
Migut.K00736 Erythranthe guttata
MSTRG.502 Avicennia marina
Nitab4.5_0001356g0010 Nicotiana tabacum
Nitab4.5_0008905g0010 Nicotiana tabacum
Nn4g22309 Nelumbo nucifera
Oeu058924.1 Olea europaea
Os11g0488500 Oryza sativa ssp. japonica
Peaxi162Scf00359g00713 Petunia axillaris
PGR119G0512 Punica granatum
Phvul.001G262100 Phaseolus vulgaris
Potri.003G171900 Populus trichocarpa
Pp3c15_20640 Physcomitrium patens
PRCOL_00005324 Prasinoderma coloniale
Prupe.1G225500 Prunus persica
Psat5g096400 Pisum sativum
PSO017G6191 Papaver somniferum
PSO478G2155 Papaver somniferum
QL03p052624 Quercus lobata
RcHm_v2.0_Chr4g0430211 Rosa chinensis
Rhsim12G0099900 Rhododendron simsii
Rhsim12G0100100 Rhododendron simsii
Sabra03G0125800 Salix brachista
SalBow1G6802 Salvia bowleyana
SalBow2G0214 Salvia bowleyana
Sc14g0009070 Simmondsia chinensis
Sed0000233 Sechium edule
SEGI_28427 Sequoiadendron giganteum
SGA_v2.0_scaffold9G04677 Striga asiatica
SMO196G0120 Selaginella moellendorffii
Solyc04g045590.3 Solanum lycopersicum
Sopen04g017520 Solanum pennellii
Sp1g10410 Schrenkiella parvula
TAR629G0787 Trochodendron aralioides
TAR629G0791 Trochodendron aralioides
THA.LOC104807130 Tarenaya hassleriana
Thecc.02G208000 Theobroma cacao
Thhalv10008060m.g Eutrema salsugineum
TPR.G17786 Trifolium pratense
TWI36G0197 Tripterygium wilfordii
unitig_747.g21126 Utricularia gibba
vmacro19384 Vaccinium macrocarpon
VMungo1383G0397 Vigna mungo
Zm00001eb169540 Zea mays

User provided reference genes

Program Settings