Gene: Zm00001eb169540

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb169540
  • Transcript Identifier Zm00001eb169540_T001
  • Gene Type Coding gene
  • Location 4 : 20147096-20164092 : positive

Gene Family Information

  • ID HOM05D006443
  • #Genes/#Species 124/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb169540_T001
  • pid Zm00001eb169540_P001
  • uniprot A0A3L6F8P2
  • uniprot A0A1Q0YC58
  • uniprot C0PA85
  • uniprot C0P8R2
  • uniprot A0A1D6PSY1
  • V4_identifier Zm00001d049183
  • V4_identifier Zm00001d049184

Descriptions

  • Description Zm00001e021439
  • Description Alpha-ketoglutarate-dependent dioxygenase alkB
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0035513
IBA
GOA Databaseoxidative RNA demethylation
GO:0035552
IBA
GOA Databaseoxidative single-stranded DNA demethylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051213
IEA
GOA Databasedioxygenase activity
GO:0008198
IBA
GOA Databaseferrous iron binding
GO:0035516
IBA
GOA Databaseoxidative DNA demethylase activity
GO:0035515
IBA
GOA Databaseoxidative RNA demethylase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004574 Alkylated DNA repair protein AlkB
IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like
IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
Mapman id Description
35.1 not assigned.annotated