Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p24610 Brassica napus
Aa31sc144G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis
Actinidia02967 Actinidia chinensis
Actinidia07718 Actinidia chinensis
Ah.16g107390 Amaranthus hybridus
AL6G24290 Arabidopsis lyrata
Aqoxy4G02989 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea
AT5G13680 Arabidopsis thaliana
ATR0559G370 Amborella trichopoda
Atru.BG.253.p Acer truncatum
Atru.chr12.503 Acer truncatum
AUR62038374 Chenopodium quinoa
AUR62038375 Chenopodium quinoa
AUR62040952 Chenopodium quinoa
BcaC04g24267 Brassica carinata
BolC9t59188H Brassica oleracea
BraA10t44524Z Brassica rapa
C09p63420 Brassica napus
CAN.G1013.4 Capsicum annuum
CANSAT56G2020 Cannabis sativa
CARHR199760 Cardamine hirsuta
Carub.0006s1184 Capsella rubella
Ca_11290_v3 Cicer arietinum L.
CBR_g230 Chara braunii
Cc02_g08190 Coffea canephora
CDE04G3644 Ceratophyllum demersum
Cfa001508 Carpinus fangiana
Ciclev10030528m.g Citrus clementina
CiPaw.01G284000 Carya illinoinensis
ClCG09G020060 Citrullus lanatus
COL.COLO4_14974 Corchorus olitorius
Cpa.g.sc1.372 Carica papaya
Cpa.g.sc1.373 Carica papaya
Cre08.g372500 Chlamydomonas reinhardtii
CsaV3_5G026400 Cucumis sativus L.
CSS0015977 Camellia sinensis var. sinensis
DCAR_027666 Daucus carota
Dinv31432 Davidia involucrata
Duzib106G0492 Durio zibethinus
ECA233G4627 Erigeron canadensis
EL10Ac2g03426 Beta vulgaris
Eucgr.J00045 Eucalyptus grandis
FAN01G2014 Fragaria x ananassa
FAN03G2412 Fragaria x ananassa
FAN06G1346 Fragaria x ananassa
FAN06G1693 Fragaria x ananassa
FAN10G4053 Fragaria x ananassa
FvH4_7g21920 Fragaria vesca
Glyma.10G289800 Glycine max
Gohir.A10G215900 Gossypium hirsutum
Gohir.D10G224900 Gossypium hirsutum
Gorai.011G255900 Gossypium raimondii
GSVIVG01016590001 Vitis vinifera
HanXRQChr08g0220321 Helianthus annuus
Haze_17035 Corylus avellana
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla
HPP92_012583 Vanilla planifolia
Hund20019 Selenicereus undatus
Lalb_Chr21g0307391 Lupinus albus
Lj5g0016728 Lotus japonicus
Lj8C87G2 Lonicera japonica
LjContig00357g0007551 Lotus japonicus
Lsat_1_v5_gn_8_16481 Lactuca sativa
Manes.07G113200 Manihot esculenta
Mapoly0015s0194 Marchantia polymorpha
MBI14_g24317_MAGBIO Magnolia biondii
MCO05G525 Micromonas commoda
MD01G1123800 Malus domestica
MD07G1193500 Malus domestica
Medtr1g115300 Medicago truncatula
MELO3C025450.2 Cucumis melo
Migut.H00419 Erythranthe guttata
Nitab4.5_0001831g0090 Nicotiana tabacum
Nitab4.5_0006342g0010 Nicotiana tabacum
Nn2g12928 Nelumbo nucifera
Nn4g26017 Nelumbo nucifera
Oeu016021.3 Olea europaea
Os07g0563700 Oryza sativa ssp. japonica
Peaxi162Scf00015g01616 Petunia axillaris
PGR044G1537 Punica granatum
PGSC0003DMG400023520 Solanum tuberosum
Phvul.007G011700 Phaseolus vulgaris
Potri.008G052400 Populus trichocarpa
Potri.010G208400 Populus trichocarpa
Pp3c8_3890 Physcomitrium patens
PRCOL_00001522 Prasinoderma coloniale
Prupe.2G231100 Prunus persica
Psat0s3149g0040 Pisum sativum
Psat0s3149g0080 Pisum sativum
Psat0s4636g0040 Pisum sativum
Psat2g006960 Pisum sativum
Psat2g034240 Pisum sativum
Psat6g224200 Pisum sativum
PSO541G4186 Papaver somniferum
PSO675G9381 Papaver somniferum
QL08p059009 Quercus lobata
RcHm_v2.0_Chr1g0366221 Rosa chinensis
Rhsim09G0107200 Rhododendron simsii
Sabra08G0037700 Salix brachista
Sc20g0002610 Simmondsia chinensis
Sed0005812 Sechium edule
SEGI_10512 Sequoiadendron giganteum
SEGI_26197 Sequoiadendron giganteum
SGA_v2.0_scaffold204G41568 Striga asiatica
SMO352G0087 Selaginella moellendorffii
Solyc05g054630.4 Solanum lycopersicum
Sopen05g033110 Solanum pennellii
Sp6g30340 Schrenkiella parvula
TAR369G0783 Trochodendron aralioides
THA.LOC104799353 Tarenaya hassleriana
Thecc.10G046600 Theobroma cacao
Thhalv10012453m.g Eutrema salsugineum
TPR.G13985 Trifolium pratense
TWI38G0752 Tripterygium wilfordii
unitig_736.g22669 Utricularia gibba
unitig_736.g22670 Utricularia gibba
vmacro07156 Vaccinium macrocarpon
VMungo0720G2582 Vigna mungo
Zm00001eb082380 Zea mays

User provided reference genes

Program Settings