Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p25520 Brassica napus
Aa31LG9G9230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis
Actinidia05538 Actinidia chinensis
Actinidia26953 Actinidia chinensis
Ah.14g088200 Amaranthus hybridus
AL6G48810 Arabidopsis lyrata
AL7G32880 Arabidopsis lyrata
Aqoxy5G01372 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea
AT4G05210 Arabidopsis thaliana
AT4G21220 Arabidopsis thaliana
ATR0618G448 Amborella trichopoda
AUR62012635 Chenopodium quinoa
AUR62022021 Chenopodium quinoa
BcaB01g01893 Brassica carinata
BcaC04g21385 Brassica carinata
BolC9t56088H Brassica oleracea
BraA01t01203Z Brassica rapa
BraA09t38127Z Brassica rapa
C09p32430 Brassica napus
CAN.G404.73 Capsicum annuum
CANSAT56G1066 Cannabis sativa
CARHR227820 Cardamine hirsuta
Carub.0007s2019 Capsella rubella
Ca_07429_v3 Cicer arietinum L.
CBR_g20160 Chara braunii
Cc00_g17320 Coffea canephora
CDE05G2602 Ceratophyllum demersum
Cfa021643 Carpinus fangiana
Ciclev10018286m.g Citrus clementina
CiPaw.09G085200 Carya illinoinensis
CiPaw.09G086300 Carya illinoinensis
ClCG01G022220 Citrullus lanatus
COL.COLO4_31719 Corchorus olitorius
Cpa.g.sc81.24 Carica papaya
CsaV3_6G049280 Cucumis sativus L.
CSS0018641 Camellia sinensis var. sinensis
CSS0045332 Camellia sinensis var. sinensis
DCAR_004187 Daucus carota
Dinv17838 Davidia involucrata
Duzib235G0913 Durio zibethinus
ECA236G4636 Erigeron canadensis
EL10Ac8g19905 Beta vulgaris
Eucgr.D00832 Eucalyptus grandis
FAN21G1433 Fragaria x ananassa
FAN25G2977 Fragaria x ananassa
FAN25G3594 Fragaria x ananassa
FvH4_3g02730 Fragaria vesca
FvH4_3g02750 Fragaria vesca
Glyma.01G240700 Glycine max
Glyma.11G002900 Glycine max
Gohir.A06G145000 Gossypium hirsutum
Gohir.D06G151200 Gossypium hirsutum
Gorai.010G176200 Gossypium raimondii
GSVIVG01012621001 Vitis vinifera
HanXRQChr05g0130041 Helianthus annuus
Haze_06726 Corylus avellana
Haze_06729 Corylus avellana
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla
HPP92_009390 Vanilla planifolia
HPP92_009395 Vanilla planifolia
Hund21374 Selenicereus undatus
Lalb_Chr16g0376341 Lupinus albus
Lj1A1224T36 Lonicera japonica
Lj1g0010466 Lotus japonicus
Lsat_1_v5_gn_5_88320 Lactuca sativa
Lsat_1_v5_gn_7_17861 Lactuca sativa
Manes.14G141100 Manihot esculenta
Mapoly0013s0096 Marchantia polymorpha
MBI02_g34312_MAGBIO Magnolia biondii
MD05G1340500 Malus domestica
MD10G1313900 Malus domestica
MD10G1314000 Malus domestica
Medtr7g047630 Medicago truncatula
Medtr7g451810 Medicago truncatula
MELO3C007369.2 Cucumis melo
Migut.M01276 Erythranthe guttata
MSTRG.16127 Avicennia marina
Nitab4.5_0000900g0100 Nicotiana tabacum
Nitab4.5_0004428g0040 Nicotiana tabacum
Nn1g03656 Nelumbo nucifera
Nn2g15920 Nelumbo nucifera
Nn5g27983 Nelumbo nucifera
Oeu002711.1 Olea europaea
Os07g0134400 Oryza sativa ssp. japonica
Peaxi162Scf00781g00047 Petunia axillaris
PGR004G1636 Punica granatum
PGR031G0385 Punica granatum
PGSC0003DMG400005049 Solanum tuberosum
Phvul.002G049200 Phaseolus vulgaris
Potri.004G039400 Populus trichocarpa
Pp3c4_25780 Physcomitrium patens
PRCOL_00005452 Prasinoderma coloniale
Prupe.4G027100 Prunus persica
Psat3g152680 Pisum sativum
PSO541G6217 Papaver somniferum
PSO675G3227 Papaver somniferum
QL05p075316 Quercus lobata
QL05p075461 Quercus lobata
QL08p032427 Quercus lobata
QL08p032503 Quercus lobata
RcHm_v2.0_Chr5g0004131 Rosa chinensis
Rhsim13G0158200 Rhododendron simsii
Sabra04G0024200 Salix brachista
SalBow8G4748 Salvia bowleyana
Sc05g0008810 Simmondsia chinensis
Sed0025568 Sechium edule
SEGI_37493 Sequoiadendron giganteum
SGA_v2.0_scaffold7G03887 Striga asiatica
SMO004G0010 Selaginella moellendorffii
SMO361G0013 Selaginella moellendorffii
Solyc03g031560.4 Solanum lycopersicum
Sopen03g005440 Solanum pennellii
Sp6g03780 Schrenkiella parvula
Sp7g19320 Schrenkiella parvula
TAR627G0699 Trochodendron aralioides
THA.LOC104812945 Tarenaya hassleriana
Thecc.06G213300 Theobroma cacao
Thhalv10025838m.g Eutrema salsugineum
TPR.G10185 Trifolium pratense
TWI38G0264 Tripterygium wilfordii
vmacro03713 Vaccinium macrocarpon
VMungo1215G0781 Vigna mungo
Zm00001eb306890 Zea mays

User provided reference genes

Program Settings