Gene: AT4G21220
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G21220
- Transcript Identifier AT4G21220.1
- Gene Type Coding gene
- Location Chr4 : 11316978-11319067 : negative
Gene Family Information
- ID HOM05D006314
- #Genes/#Species 126/95
- Phylogenetic origin
- ID ORTHO05D007970
- #Genes/#Species 125/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G21220.1
- symbol LpxD2
- Alias AtLpxD2
- full_name lipid X D2
- uniprot F4JIP6
Descriptions
- Description Trimeric LpxA-like enzymes superfamily protein
- Computational description Trimeric LpxA-like enzymes superfamily protein; FUNCTIONS IN: transferase activity; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzymes superfamily protein (TAIR:AT4G05210.1); Has 11236 Blast hits to 11169 proteins in 1804 species: Archae - 57; Bacteria - 7331; Metazoa - 7; Fungi - 9; Plants - 63; Viruses - 0; Other Eukaryotes - 3769 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:2001289 | IMP | Gene Ontology | lipid X metabolic process | 1 |
| GO:0006629 | IEA | GOA Database | lipid metabolic process | |
| GO:0009245 | IEA | GOA Database | lipid A biosynthetic process | |
| GO:0009245 | IEA | InterPro | lipid A biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016410 | IEA | Gene Ontology | N-acyltransferase activity | |
| GO:0016410 | IEA | InterPro | N-acyltransferase activity | |
| GO:0103118 | IMP | Gene Ontology | UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase activity | 1 |
| GO:0016746 | IEA | GOA Database | acyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0005739 | IDA | Gene Ontology | mitochondrion | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 5.6.3 | Lipid metabolism.lipid A biosynthesis.UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase (LpxD) |