Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p07860 Brassica napus
Aa31LG11G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2734 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.472 Anthoceros agrestis
Actinidia33290 Actinidia chinensis
Ah.06g189690 Amaranthus hybridus
AL8G34320 Arabidopsis lyrata
Aqoxy3G02409 Aquilegia oxysepala
Aqoxy3G02437 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea
AT5G58220 Arabidopsis thaliana
ATR0049G059 Amborella trichopoda
Atru.BG.53.p Acer truncatum
AUR62013813 Chenopodium quinoa
AUR62023342 Chenopodium quinoa
BcaB05g22409 Brassica carinata
BcaB05g22411 Brassica carinata
BcaC03g14111 Brassica carinata
BcaC04g19902 Brassica carinata
BolC2t07462H Brassica oleracea
BolC9t57859H Brassica oleracea
BraA02t05859Z Brassica rapa
C02p13500 Brassica napus
C09p50070 Brassica napus
CAN.G1551.1 Capsicum annuum
CANSAT54G1338 Cannabis sativa
CARHR272020 Cardamine hirsuta
Carub.0008s1876 Capsella rubella
Ca_23170_v3 Cicer arietinum L.
CBR_g30589 Chara braunii
Cc02_g26120 Coffea canephora
CDE04G2879 Ceratophyllum demersum
Cfa010995 Carpinus fangiana
Cfa010996 Carpinus fangiana
Ciclev10021110m.g Citrus clementina
CiPaw.13G019100 Carya illinoinensis
ClCG05G002670 Citrullus lanatus
COL.COLO4_19510 Corchorus olitorius
Cpa.g.sc74.89 Carica papaya
Cre17.g735950 Chlamydomonas reinhardtii
CsaV3_3G010120 Cucumis sativus L.
CSS0005578 Camellia sinensis var. sinensis
CSS0033423 Camellia sinensis var. sinensis
DCAR_025012 Daucus carota
DCAR_029548 Daucus carota
Dinv43550 Davidia involucrata
Dinv43551 Davidia involucrata
Dinv43994 Davidia involucrata
Duzib128G0100 Durio zibethinus
ECA236G2174 Erigeron canadensis
EL10Ac1g00692 Beta vulgaris
Eucgr.D01130 Eucalyptus grandis
FAN01G0355 Fragaria x ananassa
FAN03G0807 Fragaria x ananassa
FAN06G0712 Fragaria x ananassa
FAN10G2079 Fragaria x ananassa
FvH4_7g08020 Fragaria vesca
Glyma.03G093200 Glycine max
Glyma.16G080700 Glycine max
Gohir.A06G169600 Gossypium hirsutum
Gorai.N008000 Gossypium raimondii
GSVIVG01016051001 Vitis vinifera
HanXRQChr04g0123661 Helianthus annuus
HanXRQChr06g0168391 Helianthus annuus
Haze_02942 Corylus avellana
Hma1.2p1_0076F.1_g039600 Hydrangea macrophylla
HPP92_028001 Vanilla planifolia
Hund26937 Selenicereus undatus
Lalb_Chr07g0194551 Lupinus albus
Lj3g0019214 Lotus japonicus
Lj7C555G14 Lonicera japonica
Lj7C555T10 Lonicera japonica
Lsat_1_v5_gn_7_10860 Lactuca sativa
Lsat_1_v5_gn_7_10900 Lactuca sativa
Manes.08G055700 Manihot esculenta
Mapoly0090s0043 Marchantia polymorpha
MCO05G065 Micromonas commoda
MCO07G440 Micromonas commoda
MD00G1098400 Malus domestica
MD02G1236900 Malus domestica
Medtr8g010550 Medicago truncatula
MELO3C006233.2 Cucumis melo
Migut.N01815 Erythranthe guttata
MSTRG.4977 Avicennia marina
Nitab4.5_0001209g0060 Nicotiana tabacum
Nitab4.5_0001476g0040 Nicotiana tabacum
Nn1g00551 Nelumbo nucifera
Oeu050272.1 Olea europaea
Os03g0390700 Oryza sativa ssp. japonica
PGR083G0810 Punica granatum
PGSC0003DMG400001820 Solanum tuberosum
Phvul.010G033866 Phaseolus vulgaris
Potri.002G238300 Populus trichocarpa
Pp3c4_10360 Physcomitrium patens
PRCOL_00004243 Prasinoderma coloniale
Prupe.2G109200 Prunus persica
Psat4g207400 Pisum sativum
PSO063G1446 Papaver somniferum
PSO782G1498 Papaver somniferum
QL04p024264 Quercus lobata
RcHm_v2.0_Chr1g0341291 Rosa chinensis
Rhsim01G0145800 Rhododendron simsii
Sabra02G0181600 Salix brachista
SalBow4G0743 Salvia bowleyana
Sc26g0001910 Simmondsia chinensis
Sc26g0001930 Simmondsia chinensis
Sed0013667 Sechium edule
SEGI_16160 Sequoiadendron giganteum
SGA_v2.0_scaffold95G28736 Striga asiatica
SHI28983 Sapria himalayana
SMO197G0011 Selaginella moellendorffii
SMO367G0371 Selaginella moellendorffii
SMO367G0431 Selaginella moellendorffii
Solyc01g080940.3 Solanum lycopersicum
Sopen01g032530 Solanum pennellii
Sp6g19880 Schrenkiella parvula
TAR375G0229 Trochodendron aralioides
THA.LOC104799599 Tarenaya hassleriana
Thecc.03G001300 Theobroma cacao
Thhalv10014126m.g Eutrema salsugineum
TPR.G9770 Trifolium pratense
TWI59G0917 Tripterygium wilfordii
unitig_22.g5778 Utricularia gibba
vmacro21105 Vaccinium macrocarpon
VMungo0331G0592 Vigna mungo
Zm00001eb392560 Zea mays

User provided reference genes

Program Settings