Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p02440 Brassica napus
Aa31LG1G23740 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4225 Anthoceros agrestis
Actinidia09322 Actinidia chinensis
Actinidia39218 Actinidia chinensis
Ah.04g151600 Amaranthus hybridus
AL4G40030 Arabidopsis lyrata
Aqoxy1G00233 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4I0CBR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HSF0DX Arachis hypogaea
AT2G41720 Arabidopsis thaliana
ATR0188G017 Amborella trichopoda
Atru.chr1.1113 Acer truncatum
AUR62024458 Chenopodium quinoa
AUR62026047 Chenopodium quinoa
BcaNung06815 Brassica carinata
BcaNung06942 Brassica carinata
BolC4t21929H Brassica oleracea
BraA05t19238Z Brassica rapa
C04p02890 Brassica napus
CAN.G676.31 Capsicum annuum
CARHR136820 Cardamine hirsuta
Carub.0004s2400 Capsella rubella
Ca_08448_v3 Cicer arietinum L.
Ca_15068_v3 Cicer arietinum L.
CBR_g50368 Chara braunii
Cc00_g34390 Coffea canephora
Cc06_g05840 Coffea canephora
Cc06_g17630 Coffea canephora
Cc11_g03820 Coffea canephora
CDE08G0364 Ceratophyllum demersum
CDE08G0810 Ceratophyllum demersum
Ciclev10004305m.g Citrus clementina
CiPaw.10G033900 Carya illinoinensis
CiPaw.10G034000 Carya illinoinensis
ClCG10G015760 Citrullus lanatus
COL.COLO4_28304 Corchorus olitorius
COL.COLO4_28305 Corchorus olitorius
COL.COLO4_28306 Corchorus olitorius
Cpa.g.sc224.1 Carica papaya
Cpa.g.sc224.2 Carica papaya
CsaV3_3G040680 Cucumis sativus L.
CSS0036472 Camellia sinensis var. sinensis
CSS0045921 Camellia sinensis var. sinensis
CSS0047930 Camellia sinensis var. sinensis
DCAR_009064 Daucus carota
Dinv12500 Davidia involucrata
Duzib128G0400 Durio zibethinus
EL10Ac3g07098 Beta vulgaris
Eucgr.A02342 Eucalyptus grandis
FAN05G2558 Fragaria x ananassa
FAN14G5662 Fragaria x ananassa
FvH4_6g24060 Fragaria vesca
Glyma.03G136200 Glycine max
Glyma.19G138101 Glycine max
Gohir.A04G032500 Gossypium hirsutum
Gohir.D03G068901 Gossypium hirsutum
Gohir.D05G352075 Gossypium hirsutum
Gohir.D05G352101 Gossypium hirsutum
Gohir.D05G383766 Gossypium hirsutum
Gohir.D05G383800 Gossypium hirsutum
Gorai.003G091300 Gossypium raimondii
Gorai.009G383700 Gossypium raimondii
Gorai.009G450600 Gossypium raimondii
GSVIVG01033271001 Vitis vinifera
HanXRQChr10g0296661 Helianthus annuus
Haze_19847 Corylus avellana
Hma1.2p1_1041F.1_g251050 Hydrangea macrophylla
Hma1.2p1_1041F.1_g251060 Hydrangea macrophylla
HPP92_011279 Vanilla planifolia
HPP92_011301 Vanilla planifolia
Hund24702 Selenicereus undatus
Lalb_Chr01g0017341 Lupinus albus
Lj1g0017753 Lotus japonicus
Lju124C42G9 Lonicera japonica
Lsat_1_v5_gn_9_30580 Lactuca sativa
Manes.08G051400 Manihot esculenta
Mapoly0043s0117 Marchantia polymorpha
MBI17_g23173_MAGBIO Magnolia biondii
MBI17_g23175_MAGBIO Magnolia biondii
MD12G1080100 Malus domestica
Medtr7g091410 Medicago truncatula
MELO3C009803.2 Cucumis melo
MELO3C030027.2 Cucumis melo
MELO3C031816.2 Cucumis melo
Migut.J01752 Erythranthe guttata
Nitab4.5_0000586g0120 Nicotiana tabacum
Nitab4.5_0009615g0030 Nicotiana tabacum
Nitab4.5_0009615g0040 Nicotiana tabacum
Nn7g36310 Nelumbo nucifera
Oeu008911.1 Olea europaea
Os07g0213300 Oryza sativa ssp. japonica
Peaxi162Scf00130g00324 Petunia axillaris
PGR004G1513 Punica granatum
Phvul.001G131500 Phaseolus vulgaris
Potri.006G049900 Populus trichocarpa
Pp3c2_1940 Physcomitrium patens
Prupe.7G058400 Prunus persica
Psat2g007600 Pisum sativum
Psat3g074120 Pisum sativum
PSO339G0809 Papaver somniferum
PSO384G4415 Papaver somniferum
QL07p000892 Quercus lobata
QL07p000909 Quercus lobata
RcHm_v2.0_Chr3g0482651 Rosa chinensis
Rhsim03G0025500 Rhododendron simsii
Rhsim03G0025700 Rhododendron simsii
Rhsim03G0026600 Rhododendron simsii
Rhsim03G0026800 Rhododendron simsii
Rhsim03G0026900 Rhododendron simsii
Rhsim09G0172900 Rhododendron simsii
Sabra06G0034800 Salix brachista
Sc13g0001690 Simmondsia chinensis
Sed0021985 Sechium edule
SEGI_09862 Sequoiadendron giganteum
Solyc04g015950.3 Solanum lycopersicum
Sopen04g007960 Solanum pennellii
Sp4g23970 Schrenkiella parvula
TAR623G1683 Trochodendron aralioides
TAR623G1698 Trochodendron aralioides
THA.LOC104804858 Tarenaya hassleriana
Thecc.05G152200 Theobroma cacao
Thhalv10016262m.g Eutrema salsugineum
TPR.G3692 Trifolium pratense
TWI74G1340 Tripterygium wilfordii
unitig_578.g15981 Utricularia gibba
vmacro07842 Vaccinium macrocarpon
VMungo1383G2820 Vigna mungo
Zm00001eb325040 Zea mays

User provided reference genes

Program Settings