Gene: Sopen04g007960
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen04g007960
- Transcript Identifier Sopen04g007960.1
- Gene Type Coding gene
- Location Spenn-ch04 : 6563896-6573593 : positive
Gene Family Information
- ID HOM05D006106
- #Genes/#Species 129/88
- Phylogenetic origin
- ID ORTHO05D007662
- #Genes/#Species 128/88
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen04g007960.1
Descriptions
- Description EMBRYO DEFECTIVE 2654 (EMB2654) | INVOLVED IN: embryo development ending in seed dormancy | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008380 | ISO | PLAZA Integrative Orthology | RNA splicing | AT2G41720 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT2G41720 |
| GO:0010239 | ISO | PLAZA Integrative Orthology | chloroplast mRNA processing | AT2G41720 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003735 | ISO | PLAZA Integrative Orthology | structural constituent of ribosome | AT2G41720 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT2G41720 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |