Gene: Carub.0004s2400

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0004s2400
  • Transcript Identifier Carub.0004s2400.1
  • Gene Type Coding gene
  • Location scaffold_4 : 12531005-12534251 : negative

Gene Family Information

  • ID HOM05D006106
  • #Genes/#Species 129/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0004s2400.v1.1
  • pacid 39236821
  • synonym Carubv10022630m.g

Descriptions

  • Description PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT2G41720
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT2G41720
GO:0010239
ISO
PLAZA Integrative Orthologychloroplast mRNA processing AT2G41720

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003735
ISO
PLAZA Integrative Orthologystructural constituent of ribosome AT2G41720

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G41720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
35.1 not assigned.annotated