Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p00010 Brassica napus
Aa31LG4G3290 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5509 Anthoceros agrestis
Actinidia21098 Actinidia chinensis
Actinidia21099 Actinidia chinensis
Actinidia24878 Actinidia chinensis
AL4G47720 Arabidopsis lyrata
Aqoxy2G03243 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.95RMVD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9IJ3BZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NXI6YJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q6PPUG Arachis hypogaea
AT2G48120 Arabidopsis thaliana
ATR0626G088 Amborella trichopoda
Atru.chr5.1361 Acer truncatum
AUR62004906 Chenopodium quinoa
AUR62004907 Chenopodium quinoa
AUR62032753 Chenopodium quinoa
BcaB02g08738 Brassica carinata
BcaC02g12566 Brassica carinata
BcaC02g12797 Brassica carinata
BcaC08g43234 Brassica carinata
BNapus_Darmor_BZH_scaffold_188p00100 Brassica napus
BNapus_Darmor_BZH_scaffold_188p00120 Brassica napus
BNapus_Darmor_BZH_scaffold_188p00130 Brassica napus
BolC4t21679H Brassica oleracea
BolC6t35694H Brassica oleracea
BolSC55t61219H Brassica oleracea
BolSC55t61222H Brassica oleracea
BolSC55t61223H Brassica oleracea
BolSC55t61226H Brassica oleracea
BraA05t18995Z Brassica rapa
BraA05t18997Z Brassica rapa
CAN.G962.6 Capsicum annuum
CANSAT80G0718 Cannabis sativa
CARHR124900 Cardamine hirsuta
Carub.0004s3083 Capsella rubella
Ca_09774_v3 Cicer arietinum L.
CBR_g23747 Chara braunii
Cc02_g34480 Coffea canephora
CDE01G0302 Ceratophyllum demersum
Cfa006104 Carpinus fangiana
Ciclev10020923m.g Citrus clementina
CiPaw.07G094500 Carya illinoinensis
ClCG07G000070 Citrullus lanatus
COL.COLO4_09142 Corchorus olitorius
Cpa.g.sc485.5 Carica papaya
CsaV3_6G036870 Cucumis sativus L.
CSS0041846 Camellia sinensis var. sinensis
DCAR_002754 Daucus carota
Dinv01676 Davidia involucrata
Dinv13370 Davidia involucrata
Dinv16891 Davidia involucrata
Dinv27595 Davidia involucrata
Dinv32962 Davidia involucrata
Duzib138G0992 Durio zibethinus
ECA248G0902 Erigeron canadensis
EL10Ac4g09090 Beta vulgaris
Eucgr.K03393 Eucalyptus grandis
Eucgr.K03395 Eucalyptus grandis
FAN01G1545 Fragaria x ananassa
FAN03G2867 Fragaria x ananassa
FvH4_7g02610 Fragaria vesca
Glyma.02G149402 Glycine max
Glyma.10G024400 Glycine max
Gohir.A08G069800 Gossypium hirsutum
Gohir.D08G079100 Gossypium hirsutum
Gorai.004G083400 Gossypium raimondii
GSVIVG01011095001 Vitis vinifera
HanXRQChr01g0002401 Helianthus annuus
Haze_04746 Corylus avellana
Hma1.2p1_0628F.1_g191890 Hydrangea macrophylla
Hma1.2p1_0628F.1_g191900 Hydrangea macrophylla
HPP92_025128 Vanilla planifolia
Hund06953 Selenicereus undatus
Lalb_Chr21g0306561 Lupinus albus
Lj2C1178T3 Lonicera japonica
Lj5g0023557 Lotus japonicus
Lj9C654T2 Lonicera japonica
Lj9C654T3 Lonicera japonica
Lsat_1_v5_gn_5_187441 Lactuca sativa
Manes.01G210000 Manihot esculenta
Mapoly0059s0024 Marchantia polymorpha
MBI04_g32261_MAGBIO Magnolia biondii
MD03G1268900 Malus domestica
MD11G1289700 Malus domestica
Medtr1g072620 Medicago truncatula
Medtr1g072640 Medicago truncatula
MELO3C014346.2 Cucumis melo
Migut.D00263 Erythranthe guttata
MSTRG.18215 Avicennia marina
Nitab4.5_0006180g0080 Nicotiana tabacum
Nitab4.5_0007392g0030 Nicotiana tabacum
Nn1g02145 Nelumbo nucifera
Oeu001432.1 Olea europaea
Oeu011169.1 Olea europaea
Os05g0393400 Oryza sativa ssp. japonica
Peaxi162Scf00104g00220 Petunia axillaris
PGR044G1280 Punica granatum
PGSC0003DMG400000944 Solanum tuberosum
Phvul.007G169400 Phaseolus vulgaris
Potri.014G138500 Populus trichocarpa
Pp3c5_15510 Physcomitrium patens
Prupe.8G244900 Prunus persica
Psat6g138080 Pisum sativum
PSO170G1401 Papaver somniferum
PSO407G0301 Papaver somniferum
QL09p050526 Quercus lobata
QL09p051040 Quercus lobata
QL10p008835 Quercus lobata
QL12p022630 Quercus lobata
RcHm_v2.0_Chr1g0321311 Rosa chinensis
Rhsim01G0276200 Rhododendron simsii
Sabra14G0104500 Salix brachista
SalBow4G2498 Salvia bowleyana
Sc05g0005010 Simmondsia chinensis
Sed0013000 Sechium edule
SEGI_37912 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00448 Striga asiatica
SMO360G0019 Selaginella moellendorffii
Solyc09g064790.3 Solanum lycopersicum
Sopen09g026490 Solanum pennellii
Sp4g30040 Schrenkiella parvula
TAR633G0970 Trochodendron aralioides
THA.LOC104823056 Tarenaya hassleriana
Thecc.01G283800 Theobroma cacao
Thhalv10001558m.g Eutrema salsugineum
TWI14G0073 Tripterygium wilfordii
unitig_61.g26325 Utricularia gibba
vmacro14936 Vaccinium macrocarpon
Zm00001eb287380 Zea mays

User provided reference genes

Program Settings