Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p44250 Brassica napus
Aa31LG5G13330 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.381 Anthoceros agrestis
Actinidia28796 Actinidia chinensis
Actinidia35721 Actinidia chinensis
Ah.05g176710 Amaranthus hybridus
AL3G12280 Arabidopsis lyrata
Aqoxy3G00232 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea
AT3G02860 Arabidopsis thaliana
ATR0320G006 Amborella trichopoda
ATR0320G008 Amborella trichopoda
Atru.chr11.39 Acer truncatum
AUR62016215 Chenopodium quinoa
AUR62039273 Chenopodium quinoa
BolC5t35058H Brassica oleracea
C09p75990 Brassica napus
CAN.G222.64 Capsicum annuum
CANSAT01G2297 Cannabis sativa
CARHR076870 Cardamine hirsuta
Carub.0003s0196 Capsella rubella
Ca_05837_v3 Cicer arietinum L.
Ca_05839_v3 Cicer arietinum L.
Ca_05962_v3 Cicer arietinum L.
Cc02_g11480 Coffea canephora
CDE09G0547 Ceratophyllum demersum
Cfa007784 Carpinus fangiana
Ciclev10026000m.g Citrus clementina
CiPaw.03G074500 Carya illinoinensis
ClCG05G010670 Citrullus lanatus
COL.COLO4_31121 Corchorus olitorius
Cpa.g.sc116.81 Carica papaya
CsaV3_2G017210 Cucumis sativus L.
CSS0001849 Camellia sinensis var. sinensis
CSS0015748 Camellia sinensis var. sinensis
CSS0027816 Camellia sinensis var. sinensis
CSS0035544 Camellia sinensis var. sinensis
CSS0039891 Camellia sinensis var. sinensis
CSS0044039 Camellia sinensis var. sinensis
CSS0044569 Camellia sinensis var. sinensis
DCAR_014157 Daucus carota
Duzib235G0102 Durio zibethinus
ECA236G4224 Erigeron canadensis
EL10Ac3g05516 Beta vulgaris
Eucgr.F02881 Eucalyptus grandis
FAN19G0427 Fragaria x ananassa
FAN21G0982 Fragaria x ananassa
FAN23G2851 Fragaria x ananassa
FAN25G0538 Fragaria x ananassa
FAN26G2228 Fragaria x ananassa
FAN28G0351 Fragaria x ananassa
FAN28G1345 Fragaria x ananassa
FvH4_1g30030 Fragaria vesca
Glyma.02G082600 Glycine max
Glyma.16G168300 Glycine max
Gohir.A10G157800 Gossypium hirsutum
Gohir.D10G083400 Gossypium hirsutum
Gorai.011G090700 Gossypium raimondii
GSVIVG01015997001 Vitis vinifera
GSVIVG01015998001 Vitis vinifera
GSVIVG01016005001 Vitis vinifera
GSVIVG01016007001 Vitis vinifera
GSVIVG01016036001 Vitis vinifera
HanXRQChr15g0482991 Helianthus annuus
Haze_14288 Corylus avellana
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla
Hund11982 Selenicereus undatus
Lalb_Chr10g0104261 Lupinus albus
Lj2A517G40 Lonicera japonica
Lj2A517G41 Lonicera japonica
Lj4g0009716 Lotus japonicus
Lsat_1_v5_gn_3_65880 Lactuca sativa
Manes.07G077600 Manihot esculenta
Mapoly0044s0136 Marchantia polymorpha
MD02G1273300 Malus domestica
MD07G1042200 Malus domestica
Medtr5g077800 Medicago truncatula
MELO3C020924.2 Cucumis melo
Migut.K00936 Erythranthe guttata
MSTRG.15654 Avicennia marina
Nitab4.5_0011135g0050 Nicotiana tabacum
Nn3g17023 Nelumbo nucifera
Oeu048940.2 Olea europaea
Os05g0495100 Oryza sativa ssp. japonica
Peaxi162Scf00464g00430 Petunia axillaris
PGR004G1862 Punica granatum
PGSC0003DMG400013242 Solanum tuberosum
Phvul.004G098200 Phaseolus vulgaris
Potri.017G135500 Populus trichocarpa
Pp3c12_7630 Physcomitrium patens
Prupe.2G048000 Prunus persica
Psat2g045640 Pisum sativum
PSO017G1892 Papaver somniferum
PSO478G0898 Papaver somniferum
QL06p002867 Quercus lobata
QL12p000853 Quercus lobata
RcHm_v2.0_Chr3g0492111 Rosa chinensis
Rhsim10G0180400 Rhododendron simsii
Sabra17G0111300 Salix brachista
Sabra17G0114300 Salix brachista
SalBow1G7757 Salvia bowleyana
Sc22g0001300 Simmondsia chinensis
Sed0003139 Sechium edule
Sed0018686 Sechium edule
Sed0022983 Sechium edule
Sed0023512 Sechium edule
Sed0026765 Sechium edule
SEGI_17538 Sequoiadendron giganteum
SEGI_38635 Sequoiadendron giganteum
SGA_v2.0_scaffold115G32097 Striga asiatica
SHI30124 Sapria himalayana
SHI30126 Sapria himalayana
Solyc11g011490.2 Solanum lycopersicum
Solyc11g011495.1 Solanum lycopersicum
Sopen11g006280 Solanum pennellii
Sp3g01890 Schrenkiella parvula
TAR623G0083 Trochodendron aralioides
TAR623G0312 Trochodendron aralioides
THA.LOC104827184 Tarenaya hassleriana
Thecc.06G019600 Theobroma cacao
Thhalv10021193m.g Eutrema salsugineum
TPR.G23647 Trifolium pratense
TPR.G36575 Trifolium pratense
TWI53G0527 Tripterygium wilfordii
TWI74G0222 Tripterygium wilfordii
unitig_0.g1692 Utricularia gibba
vmacro20589 Vaccinium macrocarpon
VMungo0464G0699 Vigna mungo
Zm00001eb291600 Zea mays

User provided reference genes

Program Settings