Gene: Solyc11g011490.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc11g011490.2
- Transcript Identifier Solyc11g011490.2.1
- Gene Type Coding gene
- Location SL4.0ch11 : 4568825-4572709 : positive
Gene Family Information
- ID HOM05D006010
- #Genes/#Species 131/90
- Phylogenetic origin
- ID ORTHO05D007381
- #Genes/#Species 131/90
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc11g011490.2.1
- uniprot A0A3Q7IRI0
- gene_id Solyc11g011490
Descriptions
- Description Zinc ion binding protein (AHRD V3.3 *** A0A2U1KM01_ARTAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048478 | IBA | GOA Database | replication fork protection | |
| GO:1903427 | ISO | PLAZA Integrative Orthology | negative regulation of reactive oxygen species biosynthetic process | AT3G02860 |
| GO:0048838 | ISO | PLAZA Integrative Orthology | release of seed from dormancy | AT3G02860 |
| GO:0042542 | ISO | PLAZA Integrative Orthology | response to hydrogen peroxide | AT3G02860 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT3G02860 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT3G02860 |
| GO:0006979 | ISO | PLAZA Integrative Orthology | response to oxidative stress | AT3G02860 |
| GO:0010030 | ISO | PLAZA Integrative Orthology | positive regulation of seed germination | AT3G02860 |
| GO:0033314 | IBA | GOA Database | mitotic DNA replication checkpoint signaling | |
| GO:0033260 | IBA | GOA Database | nuclear DNA replication | |
| GO:0044773 | IBA | GOA Database | mitotic DNA damage checkpoint signaling | |
| GO:0007049 | IEA | GOA Database | cell cycle |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | IEA | GOA Database | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G02860 |
| GO:0005634 | IBA IEA | GOA Database | nucleus | |
| GO:0005681 | IEA | GOA Database | spliceosomal complex | |
| GO:0005681 | IEA | InterPro | spliceosomal complex | |
| GO:0005694 | IEA | GOA Database | chromosome | |
| GO:0016607 | IEA | GOA Database | nuclear speck |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |