Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p27250 Brassica napus
Aa31LG8G8050 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1658 Anthoceros agrestis
Actinidia32123 Actinidia chinensis
Ah.04g150140 Amaranthus hybridus
AL3G35400 Arabidopsis lyrata
Aqoxy2G04031 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FEFU12 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M52QXX Arachis hypogaea
AT3G21350 Arabidopsis thaliana
ATR0705G221 Amborella trichopoda
Atru.chr12.732 Acer truncatum
AUR62018448 Chenopodium quinoa
AUR62020986 Chenopodium quinoa
BcaB06g26231 Brassica carinata
BcaC05g28175 Brassica carinata
BolC5t32941H Brassica oleracea
BraA05t21615Z Brassica rapa
C05p42110 Brassica napus
CAN.G1143.30 Capsicum annuum
CANSAT21G1984 Cannabis sativa
CARHR097270 Cardamine hirsuta
Carub.0003s2138 Capsella rubella
Ca_23283_v3 Cicer arietinum L.
CBR_g22489 Chara braunii
Cc00_g23930 Coffea canephora
Cfa019373 Carpinus fangiana
Cfa019374 Carpinus fangiana
Cfa023417 Carpinus fangiana
Ciclev10026335m.g Citrus clementina
CiPaw.02G144100 Carya illinoinensis
ClCG07G013490 Citrullus lanatus
COL.COLO4_30547 Corchorus olitorius
Cpa.g.c26718.1 Carica papaya
Cpa.g.sc131.1 Carica papaya
Cre11.g467659 Chlamydomonas reinhardtii
CsaV3_3G023410 Cucumis sativus L.
CSS0027495 Camellia sinensis var. sinensis
DCAR_007600 Daucus carota
Dinv30416 Davidia involucrata
Dinv37956 Davidia involucrata
Duzib192G0276 Durio zibethinus
ECA248G1573 Erigeron canadensis
EL10Ac3g07358 Beta vulgaris
Eucgr.J02602 Eucalyptus grandis
FAN02G1749 Fragaria x ananassa
FAN05G1114 Fragaria x ananassa
FAN09G1055 Fragaria x ananassa
FvH4_6g32730 Fragaria vesca
Glyma.08G199200 Glycine max
Gohir.A01G226000 Gossypium hirsutum
Gohir.A10G063800 Gossypium hirsutum
Gohir.D01G215700 Gossypium hirsutum
Gohir.D10G065400 Gossypium hirsutum
Gorai.002G261900 Gossypium raimondii
Gorai.011G069400 Gossypium raimondii
GSVIVG01016927001 Vitis vinifera
HanXRQChr15g0489361 Helianthus annuus
Haze_15888 Corylus avellana
Hma1.2p1_0764F.1_g214960 Hydrangea macrophylla
Hma1.2p1_2308F.1_g319480 Hydrangea macrophylla
HPP92_007682 Vanilla planifolia
Lalb_Chr01g0013231 Lupinus albus
Lj3g0005277 Lotus japonicus
Lj3g0016976 Lotus japonicus
Lj5A50T68 Lonicera japonica
Lj5C50T14 Lonicera japonica
Lsat_1_v5_gn_2_99820 Lactuca sativa
Lsat_1_v5_gn_5_181040 Lactuca sativa
Manes.04G136400 Manihot esculenta
Manes.11G030300 Manihot esculenta
Mapoly0012s0176 Marchantia polymorpha
MBI01_g35895_MAGBIO Magnolia biondii
MD14G1079700 Malus domestica
Medtr0361s0030 Medicago truncatula
Medtr8g015230 Medicago truncatula
MELO3C013015.2 Cucumis melo
Migut.I00969 Erythranthe guttata
Migut.I00971 Erythranthe guttata
Migut.O00801 Erythranthe guttata
MSTRG.11013 Avicennia marina
Nitab4.5_0001172g0180 Nicotiana tabacum
Nitab4.5_0002423g0030 Nicotiana tabacum
Nitab4.5_0008212g0010 Nicotiana tabacum
Nn4g25123 Nelumbo nucifera
Oeu024256.1 Olea europaea
Os06g0217500 Oryza sativa ssp. japonica
Peaxi162Scf00038g01151 Petunia axillaris
PGR102G2175 Punica granatum
PGSC0003DMG400026839 Solanum tuberosum
PGSC0003DMG401002516 Solanum tuberosum
Phvul.010G143300 Phaseolus vulgaris
Pp3c11_22580 Physcomitrium patens
Pp3c7_2870 Physcomitrium patens
Prupe.3G054900 Prunus persica
Psat4g195960 Pisum sativum
PSO210G0258 Papaver somniferum
PSO210G7608 Papaver somniferum
QL05p018100 Quercus lobata
QL08p056642 Quercus lobata
RcHm_v2.0_Chr2g0141751 Rosa chinensis
RcHm_v2.0_Chr5g0064381 Rosa chinensis
Rhsim08G0229500 Rhododendron simsii
Rhsim08G0229700 Rhododendron simsii
Sabra17G0126400 Salix brachista
SalBow6G5073 Salvia bowleyana
Sc19g0007830 Simmondsia chinensis
Sed0025844 Sechium edule
SEGI_18792 Sequoiadendron giganteum
SGA_v2.0_scaffold45G16998 Striga asiatica
SHI11207 Sapria himalayana
SMO143G0120 Selaginella moellendorffii
Solyc03g121210.4 Solanum lycopersicum
Solyc12g044640.2 Solanum lycopersicum
Sopen03g040020 Solanum pennellii
Sopen12g023060 Solanum pennellii
Sp3g19410 Schrenkiella parvula
TAR623G1297 Trochodendron aralioides
TAR623G1541 Trochodendron aralioides
TAR624G0741 Trochodendron aralioides
TAR636G3265 Trochodendron aralioides
THA.LOC104805924 Tarenaya hassleriana
Thecc.06G103400 Theobroma cacao
Thhalv10021373m.g Eutrema salsugineum
TPR.G39766 Trifolium pratense
TWI12G1051 Tripterygium wilfordii
unitig_32.g10986 Utricularia gibba
vmacro18833 Vaccinium macrocarpon
VMungo0331G0822 Vigna mungo
Zm00001eb084330 Zea mays
Zm00001eb192830 Zea mays
Zm00001eb372970 Zea mays

User provided reference genes

Program Settings