Gene: Solyc12g044640.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g044640.2
  • Transcript Identifier Solyc12g044640.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 59334074-59338752 : negative

Gene Family Information

  • ID HOM05D005962
  • #Genes/#Species 132/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g044640.2.1
  • uniprot A0A3Q7JWA7
  • gene_id Solyc12g044640

Descriptions

  • Description Mediator of RNA polymerase II transcription subunit 6 (AHRD V3.3 *** A0A2G3D0R6_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IBA
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II
GO:0045893
IEA
GOA Databasepositive regulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003712
IEA
GOA Databasetranscription coregulator activity
GO:0003712
IEA
InterProtranscription coregulator activity
GO:0003713
IBA
GOA Databasetranscription coactivator activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G21350

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016592
IBA
IEA
GOA Databasemediator complex
GO:0016592
IEA
InterPromediator complex
GO:0005634
IEA
GOA Databasenucleus
GO:0070847
IBA
GOA Databasecore mediator complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016820 Mediator complex, subunit Med6, metazoa/plant
IPR038566 Mediator complex, subunit Med6 superfamily
IPR007018 Mediator complex, subunit Med6
Mapman id Description
15.3.4.4.1.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.head module.component MED6