Gene: Sopen03g040020
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g040020
- Transcript Identifier Sopen03g040020.1
- Gene Type Coding gene
- Location Spenn-ch03 : 73966524-73969458 : negative
Gene Family Information
- ID HOM05D005962
- #Genes/#Species 132/95
- Phylogenetic origin
- ID ORTHO05D007325
- #Genes/#Species 132/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g040020.1
Descriptions
- Description MED6 | FUNCTIONS IN: RNA polymerase II transcription mediator activity | INVOLVED IN: regulation of transcription from RNA polymerase II promoter | LOCATED IN: mediator complex | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Mediator complex, subunit Med6 , Mediator complex, subunit Med6, metazoa/plant
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006357 | IEA | InterPro | regulation of transcription by RNA polymerase II |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003712 | IEA | InterPro | transcription coregulator activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G21350 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016592 | IEA | InterPro | mediator complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.3.4.4.1.1 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.head module.component MED6 |