Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p02040 Brassica napus
Aa31LG6G13690 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis
Actinidia09329 Actinidia chinensis
Actinidia39225 Actinidia chinensis
Ah.13g075070 Amaranthus hybridus
AL7G15130 Arabidopsis lyrata
Aqoxy5G03564 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea
AT4G35910 Arabidopsis thaliana
ATR0686G233 Amborella trichopoda
Atru.chr1.1098 Acer truncatum
Atru.chr1.1100 Acer truncatum
AUR62024451 Chenopodium quinoa
AUR62026040 Chenopodium quinoa
BcaNung03520 Brassica carinata
BcaNung03522 Brassica carinata
BcaNung04276 Brassica carinata
BolC1t00214H Brassica oleracea
BolC7t46624H Brassica oleracea
BraA01t00193Z Brassica rapa
C01p02220 Brassica napus
C07p62070 Brassica napus
CAN.G128.8 Capsicum annuum
CANSAT78G0457 Cannabis sativa
CARHR244310 Cardamine hirsuta
Carub.0007s0431 Capsella rubella
Ca_08457_v3 Cicer arietinum L.
CBR_g982 Chara braunii
Cc06_g12380 Coffea canephora
Cc06_g17560 Coffea canephora
CDE09G0169 Ceratophyllum demersum
Cfa008569 Carpinus fangiana
Cfa017604 Carpinus fangiana
Cfa017749 Carpinus fangiana
Ciclev10004945m.g Citrus clementina
CiPaw.08G166600 Carya illinoinensis
ClCG10G016640 Citrullus lanatus
COL.COLO4_28284 Corchorus olitorius
Cpa.g.sc92.52 Carica papaya
Cre01.g043500 Chlamydomonas reinhardtii
CsaV3_3G039700 Cucumis sativus L.
CSS0022562 Camellia sinensis var. sinensis
DCAR_009061 Daucus carota
Dinv12483 Davidia involucrata
Dinv39604 Davidia involucrata
Duzib093G2041 Durio zibethinus
ECA236G1702 Erigeron canadensis
EL10Ac3g07091 Beta vulgaris
Eucgr.A02347 Eucalyptus grandis
FAN02G2268 Fragaria x ananassa
FAN05G5216 Fragaria x ananassa
FAN14G1069 Fragaria x ananassa
FvH4_6g23820 Fragaria vesca
Glyma.03G136900 Glycine max
Glyma.19G139200 Glycine max
Gohir.A11G167500 Gossypium hirsutum
Gohir.D11G173800 Gossypium hirsutum
Gorai.007G186200 Gossypium raimondii
GSVIVG01033275001 Vitis vinifera
HanXRQChr09g0252561 Helianthus annuus
Haze_19854 Corylus avellana
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla
HPP92_017762 Vanilla planifolia
HPP92_017763 Vanilla planifolia
Hund05286 Selenicereus undatus
Lalb_Chr25g0287121 Lupinus albus
Lj1g0013042 Lotus japonicus
Lju124A41G42 Lonicera japonica
Lsat_1_v5_gn_8_81281 Lactuca sativa
Manes.09G022000 Manihot esculenta
Mapoly0165s0023 Marchantia polymorpha
MBI16_g31719_MAGBIO Magnolia biondii
MD12G1074000 Malus domestica
MD12G1074100 Malus domestica
Medtr7g091500 Medicago truncatula
MELO3C009712.2 Cucumis melo
Migut.J01758 Erythranthe guttata
MSTRG.19860 Avicennia marina
Nitab4.5_0008648g0010 Nicotiana tabacum
Nitab4.5_0009442g0020 Nicotiana tabacum
Nn8g40507 Nelumbo nucifera
Nn8g40508 Nelumbo nucifera
Oeu008914.1 Olea europaea
Oeu008916.1 Olea europaea
Oeu017944.1 Olea europaea
Os12g0588900 Oryza sativa ssp. japonica
Peaxi162Scf00354g00225 Petunia axillaris
Peaxi162Scf00618g00022 Petunia axillaris
PGR004G0721 Punica granatum
PGSC0003DMG400023688 Solanum tuberosum
Phvul.001G132100 Phaseolus vulgaris
Potri.006G051300 Populus trichocarpa
Pp3c14_19420 Physcomitrium patens
PRCOL_00001836 Prasinoderma coloniale
Prupe.7G060900 Prunus persica
Psat3g072720 Pisum sativum
Psat3g072840 Pisum sativum
PSO782G3339 Papaver somniferum
QL07p000522 Quercus lobata
QL07p000555 Quercus lobata
RcHm_v2.0_Chr3g0482381 Rosa chinensis
Rhsim03G0020400 Rhododendron simsii
Rhsim03G0021100 Rhododendron simsii
Rhsim03G0022400 Rhododendron simsii
Rhsim03G0022600 Rhododendron simsii
Rhsim03G0024000 Rhododendron simsii
Sabra06G0036000 Salix brachista
SalBow6G0452 Salvia bowleyana
Sc13g0001730 Simmondsia chinensis
Sc13g0001740 Simmondsia chinensis
Sed0001053 Sechium edule
SEGI_18184 Sequoiadendron giganteum
SGA_v2.0_scaffold69G23116 Striga asiatica
SHI32975 Sapria himalayana
SMO145G0218 Selaginella moellendorffii
Solyc10g080110.3 Solanum lycopersicum
Sopen10g030730 Solanum pennellii
Sp7g34530 Schrenkiella parvula
TAR633G2604 Trochodendron aralioides
TAR633G2718 Trochodendron aralioides
TAR636G2120 Trochodendron aralioides
THA.LOC104811196 Tarenaya hassleriana
Thecc.05G153300 Theobroma cacao
Thhalv10025158m.g Eutrema salsugineum
TPR.G854 Trifolium pratense
TWI74G0083 Tripterygium wilfordii
vmacro07854 Vaccinium macrocarpon
VMungo1383G3081 Vigna mungo
Zm00001eb135000 Zea mays

User provided reference genes

Program Settings