Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p32870 Brassica napus
Aa31LG1G2270 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.35 Anthoceros agrestis
Actinidia02084 Actinidia chinensis
Actinidia14469 Actinidia chinensis
Ah.02g116190 Amaranthus hybridus
Ah.02g116200 Amaranthus hybridus
AL1G23690 Arabidopsis lyrata
Aqoxy7G00633 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FFRS2J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J86H7Q Arachis hypogaea
AT1G12370 Arabidopsis thaliana
ATR0810G103 Amborella trichopoda
Atru.chr9.1440 Acer truncatum
AUR62010516 Chenopodium quinoa
AUR62017386 Chenopodium quinoa
BcaB03g13191 Brassica carinata
BcaB03g13192 Brassica carinata
BolC1t01666H Brassica oleracea
BolC2t10740H Brassica oleracea
BolC8t49167H Brassica oleracea
BraA08t35209Z Brassica rapa
C08p15390 Brassica napus
CAN.G630.67 Capsicum annuum
CANSAT21G1830 Cannabis sativa
CARHR012660 Cardamine hirsuta
Carub.0001s1203 Capsella rubella
Ca_06688_v3 Cicer arietinum L.
CBR_g17934 Chara braunii
Cc08_g13290 Coffea canephora
Cc08_g13300 Coffea canephora
CDE12G0141 Ceratophyllum demersum
Cfa012022 Carpinus fangiana
Ciclev10019819m.g Citrus clementina
CiPaw.11G147000 Carya illinoinensis
ClCG01G003610 Citrullus lanatus
COL.COLO4_23868 Corchorus olitorius
COL.COLO4_29220 Corchorus olitorius
Cpa.g.sc29.82 Carica papaya
Cre02.g118000 Chlamydomonas reinhardtii
Cre12.g533000 Chlamydomonas reinhardtii
CsaV3_5G003710 Cucumis sativus L.
CSS0003633 Camellia sinensis var. sinensis
DCAR_008454 Daucus carota
Dinv37758 Davidia involucrata
Duzib205G0406 Durio zibethinus
ECA233G1449 Erigeron canadensis
ECA233G5871 Erigeron canadensis
EL10Ac5g12625 Beta vulgaris
Eucgr.D01985 Eucalyptus grandis
FAN04G1127 Fragaria x ananassa
FAN08G2136 Fragaria x ananassa
FAN13G1573 Fragaria x ananassa
FAN18G2769 Fragaria x ananassa
FvH4_5g00790 Fragaria vesca
Glyma.01G212300 Glycine max
Glyma.11G029500 Glycine max
Gohir.A03G011600 Gossypium hirsutum
Gohir.D03G158300 Gossypium hirsutum
Gorai.003G166800 Gossypium raimondii
GSVIVG01004905001 Vitis vinifera
HanXRQChr07g0188641 Helianthus annuus
HanXRQChr10g0306201 Helianthus annuus
Haze_09046 Corylus avellana
Haze_26274 Corylus avellana
Hma1.2p1_0138F.1_g063110 Hydrangea macrophylla
Hma1.2p1_0138F.1_g063120 Hydrangea macrophylla
HPP92_020977 Vanilla planifolia
Hund11561 Selenicereus undatus
Lalb_Chr09g0324521 Lupinus albus
Lj2g0010887 Lotus japonicus
Lj8A254T79 Lonicera japonica
Lj8C254T7 Lonicera japonica
Lsat_1_v5_gn_6_9740 Lactuca sativa
Manes.01G072400 Manihot esculenta
Mapoly0149s0026 Marchantia polymorpha
MBI04_g35270_MAGBIO Magnolia biondii
MCO01G340 Micromonas commoda
MCO05G034 Micromonas commoda
MCO16G424 Micromonas commoda
MD04G1078900 Malus domestica
Medtr5g011780 Medicago truncatula
MELO3C005584.2 Cucumis melo
Migut.A00839 Erythranthe guttata
MSTRG.25552 Avicennia marina
Nitab4.5_0003534g0090 Nicotiana tabacum
Nitab4.5_0010237g0040 Nicotiana tabacum
Nn4g26386 Nelumbo nucifera
Oeu040058.2 Olea europaea
Os10g0167600 Oryza sativa ssp. japonica
Peaxi162Scf00271g00133 Petunia axillaris
PGR031G0042 Punica granatum
PGSC0003DMG400003932 Solanum tuberosum
Phvul.002G059800 Phaseolus vulgaris
Phvul.002G151001 Phaseolus vulgaris
Potri.001G116800 Populus trichocarpa
Pp3c5_3400 Physcomitrium patens
PRCOL_00005710 Prasinoderma coloniale
PRCOL_00007238 Prasinoderma coloniale
Prupe.5G080300 Prunus persica
Psat2g179680 Pisum sativum
PSO478G5024 Papaver somniferum
PSO782G2305 Papaver somniferum
QL09p013714 Quercus lobata
QL12p015122 Quercus lobata
RcHm_v2.0_Chr2g0152691 Rosa chinensis
RcHm_v2.0_Chr7g0201231 Rosa chinensis
RcHm_v2.0_Chr7g0201341 Rosa chinensis
Rhsim07G0193500 Rhododendron simsii
Sabra01G0089600 Salix brachista
SalBow6G1575 Salvia bowleyana
Sc07g0009420 Simmondsia chinensis
Sed0024879 Sechium edule
SEGI_03642 Sequoiadendron giganteum
SEGI_07050 Sequoiadendron giganteum
SEGI_07453 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32808 Striga asiatica
SMO137G0163 Selaginella moellendorffii
Solyc08g079530.3 Solanum lycopersicum
Sopen08g027900 Solanum pennellii
Sp1g10970 Schrenkiella parvula
TAR375G0281 Trochodendron aralioides
TAR375G0547 Trochodendron aralioides
TAR375G0948 Trochodendron aralioides
THA.LOC104809442 Tarenaya hassleriana
Thecc.03G262500 Theobroma cacao
Thhalv10007458m.g Eutrema salsugineum
TPR.G19593 Trifolium pratense
TWI81G1092 Tripterygium wilfordii
unitig_744.g24322 Utricularia gibba
vmacro00223 Vaccinium macrocarpon
VMungo1215G0841 Vigna mungo
Zm00001eb026960 Zea mays

User provided reference genes

Program Settings