Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p03670 Brassica napus
Aa31LG1G25010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3742 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3754 Anthoceros agrestis
Actinidia05269 Actinidia chinensis
Actinidia13103 Actinidia chinensis
Ah.16g107680 Amaranthus hybridus
AL4G41850 Arabidopsis lyrata
Aqoxy4G03207 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.09MUKR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SSK647 Arachis hypogaea
AT2G43190 Arabidopsis thaliana
ATR0618G001 Amborella trichopoda
Atru.chr8.2559 Acer truncatum
AUR62040047 Chenopodium quinoa
BolC4t22063H Brassica oleracea
BraA03t11621Z Brassica rapa
BraA05t19352Z Brassica rapa
C04p04270 Brassica napus
CAN.G1676.1 Capsicum annuum
CANSAT80G1885 Cannabis sativa
CARHR138250 Cardamine hirsuta
Carub.0004s2566 Capsella rubella
Ca_24451_v3 Cicer arietinum L.
Ca_28014_v3 Cicer arietinum L.
CBR_g48398 Chara braunii
Cc11_g02990 Coffea canephora
CDE05G1905 Ceratophyllum demersum
Cfa025603 Carpinus fangiana
Ciclev10012269m.g Citrus clementina
CiPaw.09G179800 Carya illinoinensis
ClCG10G020530 Citrullus lanatus
COL.COLO4_06720 Corchorus olitorius
COL.COLO4_27076 Corchorus olitorius
Cpa.g.sc45.33 Carica papaya
Cre03.g184050 Chlamydomonas reinhardtii
CsaV3_3G035590 Cucumis sativus L.
CSS0006806 Camellia sinensis var. sinensis
CSS0011524 Camellia sinensis var. sinensis
DCAR_009286 Daucus carota
Dinv08367 Davidia involucrata
Dinv35712 Davidia involucrata
Dinv37257 Davidia involucrata
Duzib093G1198 Durio zibethinus
Duzib106G1607 Durio zibethinus
ECA238G3410 Erigeron canadensis
EL10Ac7g17355 Beta vulgaris
Eucgr.D00282 Eucalyptus grandis
FAN02G3306 Fragaria x ananassa
FAN09G4005 Fragaria x ananassa
FAN14G3435 Fragaria x ananassa
FvH4_6g15400 Fragaria vesca
Glyma.01G229300 Glycine max
Glyma.11G012100 Glycine max
Gohir.A01G216800 Gossypium hirsutum
Gohir.D01G205600 Gossypium hirsutum
Gorai.002G249900 Gossypium raimondii
Gorai.004G066200 Gossypium raimondii
GSVIVG01025628001 Vitis vinifera
HanXRQChr07g0195281 Helianthus annuus
Haze_20644 Corylus avellana
Hma1.2p1_0350F.1_g132760 Hydrangea macrophylla
HPP92_015422 Vanilla planifolia
HPP92_026974 Vanilla planifolia
Lalb_Chr01g0022971 Lupinus albus
Lj1g0007669 Lotus japonicus
Lj2C107T12 Lonicera japonica
LjContig00222g0022274 Lotus japonicus
Lsat_1_v5_gn_3_120281 Lactuca sativa
Manes.09G081419 Manihot esculenta
Mapoly0065s0033 Marchantia polymorpha
MBI19_g11838_MAGBIO Magnolia biondii
MD04G1104000 Malus domestica
MD12G1123900 Malus domestica
Medtr5g007880 Medicago truncatula
Medtr5g014220 Medicago truncatula
MELO3C009318.2 Cucumis melo
Migut.J00418 Erythranthe guttata
MSTRG.5723 Avicennia marina
Nitab4.5_0000669g0240 Nicotiana tabacum
Nitab4.5_0001763g0100 Nicotiana tabacum
Nitab4.5_0002614g0010 Nicotiana tabacum
Nitab4.5_0005274g0030 Nicotiana tabacum
Nn2g10678 Nelumbo nucifera
Oeu029421.1 Olea europaea
Oeu060085.1 Olea europaea
Os05g0472300 Oryza sativa ssp. japonica
Peaxi162Scf00005g04511 Petunia axillaris
Peaxi162Scf01604g00016 Petunia axillaris
PGR083G2396 Punica granatum
PGSC0003DMG400001766 Solanum tuberosum
PGSC0003DMG400004235 Solanum tuberosum
Phvul.002G038100 Phaseolus vulgaris
Potri.001G033900 Populus trichocarpa
Pp3c19_14730 Physcomitrium patens
Pp3c22_13580 Physcomitrium patens
Prupe.4G230000 Prunus persica
Psat0s769g0080 Pisum sativum
Psat4g011240 Pisum sativum
PSO063G0740 Papaver somniferum
PSO063G1014 Papaver somniferum
QL03p054300 Quercus lobata
QL07p024280 Quercus lobata
RcHm_v2.0_Chr3g0468881 Rosa chinensis
SalBow3G2410 Salvia bowleyana
SalBow3G3945 Salvia bowleyana
Sc15g0002680 Simmondsia chinensis
Sc23g0005710 Simmondsia chinensis
Sed0002034 Sechium edule
SEGI_25369 Sequoiadendron giganteum
SGA_v2.0_scaffold75G24879 Striga asiatica
SHI12568 Sapria himalayana
SMO302G0051 Selaginella moellendorffii
SMO353G0015 Selaginella moellendorffii
Solyc09g007370.4 Solanum lycopersicum
Sopen09g002270 Solanum pennellii
Sp4g25310 Schrenkiella parvula
TAR375G0626 Trochodendron aralioides
TAR633G1288 Trochodendron aralioides
TAR636G2100 Trochodendron aralioides
TAR636G2555 Trochodendron aralioides
THA.LOC104826952 Tarenaya hassleriana
Thecc.05G054500 Theobroma cacao
Thhalv10001741m.g Eutrema salsugineum
TPR.G38017 Trifolium pratense
TPR.G5312 Trifolium pratense
TWI74G1051 Tripterygium wilfordii
unitig_32.g11040 Utricularia gibba
vmacro08700 Vaccinium macrocarpon
VMungo1215G0672 Vigna mungo
Zm00001eb270830 Zea mays
Zm00001eb286610 Zea mays
Zm00001eb290190 Zea mays

User provided reference genes

Program Settings