Gene: AT2G43190

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G43190
  • Transcript Identifier AT2G43190.5
  • Gene Type Coding gene
  • Location Chr2 : 17956220-17957833 : positive

Gene Family Information

  • ID HOM05D005876
  • #Genes/#Species 133/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G43190.5
  • symbol POP4
  • full_name similar to yeast POP4
  • uniprot Q9ZW76

Descriptions

  • Description ribonuclease P family protein
  • Computational description ribonuclease P family protein; FUNCTIONS IN: ribonuclease activity, ribonuclease P activity, RNA binding; INVOLVED IN: tRNA processing, mRNA cleavage, rRNA processing; LOCATED IN: ribonuclease P complex, nucleolar ribonuclease P complex, ribonuclease MRP complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonuclease P/MRP, subunit p29, eukaryotic/archaeal (InterPro:IPR002730), Ribonuclease P/MRP, p29 subunit, eukaryotic (InterPro:IPR016848); Has 293 Blast hits to 293 proteins in 155 species: Archae - 0; Bacteria - 0; Metazoa - 120; Fungi - 100; Plants - 34; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0001682
IEA
Gene OntologytRNA 5'-leader removal
GO:0001682
IEA
InterProtRNA 5'-leader removal
GO:0008033
IMP
Gene OntologytRNA processing1
GO:0008033
IEA
InterProtRNA processing
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0006364
IMP
IBA
Gene OntologyrRNA processing1 2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033204
IBA
IEA
Gene Ontologyribonuclease P RNA binding2
GO:0033204
IEA
InterProribonuclease P RNA binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0004526
IEA
Gene Ontologyribonuclease P activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0000172
IBA
IEA
Gene Ontologyribonuclease MRP complex2
GO:0000172
IEA
InterProribonuclease MRP complex
GO:0030677
IEA
GOA Databaseribonuclease P complex
GO:0030677
IBA
Gene Ontologyribonuclease P complex2
GO:0030677
IEA
InterProribonuclease P complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036980 Ribonuclease P/MRP subunit Rpp29 superfamily
IPR023534 Rof/RNase P-like
IPR016848 Ribonuclease P/MRP subunit Rpp29
IPR002730 Ribonuclease P protein subunit Rpp29/RNP1
Mapman id Description
16.6.3.4 RNA processing.ribonuclease activities.RNA-dependent RNase P complex.component RPP29/POP4