Gene: COL.COLO4_06720

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_06720
  • Transcript Identifier COL.rna5535
  • Gene Type Coding gene
  • Location AWUE01012855.1 : 5925-8116 : negative

Gene Family Information

  • ID HOM05D005876
  • #Genes/#Species 133/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna5535
  • GenBank OMP08163.1
  • id gene6692
  • gene_name COLO4_06720
  • uniprot A0A1R3KM48

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0001682
IEA
GOA DatabasetRNA 5'-leader removal
GO:0001682
IEA
InterProtRNA 5'-leader removal
GO:0008033
ISO
PLAZA Integrative OrthologytRNA processing AT2G43190
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT2G43190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033204
IEA
GOA Databaseribonuclease P RNA binding
GO:0033204
IEA
InterProribonuclease P RNA binding
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D005876

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030677
IEA
GOA Databaseribonuclease P complex
GO:0030677
IEA
InterProribonuclease P complex
GO:0000172
IEA
GOA Databaseribonuclease MRP complex
GO:0000172
IEA
InterProribonuclease MRP complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016848 Ribonuclease P/MRP subunit Rpp29
Mapman id Description
16.6.3.4 RNA processing.ribonuclease activities.RNA-dependent RNase P complex.component RPP29/POP4