Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p33850 Brassica napus
Aa31LG5G15210 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3806 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2882 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2883 Anthoceros agrestis
Ah.06g192190 Amaranthus hybridus
AL3G14980 Arabidopsis lyrata
Aqoxy5G00419 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BBX725 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E80190 Arachis hypogaea
AT3G04820 Arabidopsis thaliana
ATR0665G477 Amborella trichopoda
Atru.chr2.784 Acer truncatum
Atru.chr2.785 Acer truncatum
AUR62001034 Chenopodium quinoa
AUR62004921 Chenopodium quinoa
BcaB04g19298 Brassica carinata
BcaC01g04347 Brassica carinata
BolC3t16404H Brassica oleracea
BraA03t12559Z Brassica rapa
C03p41160 Brassica napus
CAN.G134.120 Capsicum annuum
CANSAT54G2140 Cannabis sativa
CARHR079070 Cardamine hirsuta
Carub.0003s0400 Capsella rubella
Ca_09411_v3 Cicer arietinum L.
CBR_g36821 Chara braunii
Cc02_g31830 Coffea canephora
Cc02_g31840 Coffea canephora
CDE05G3473 Ceratophyllum demersum
Cfa006452 Carpinus fangiana
Ciclev10003382m.g Citrus clementina
CiPaw.07G064800 Carya illinoinensis
CiPaw.07G064900 Carya illinoinensis
ClCG06G009160 Citrullus lanatus
ClCG06G009190 Citrullus lanatus
COL.COLO4_15299 Corchorus olitorius
Cpa.g.sc117.72 Carica papaya
Cre01.g007651 Chlamydomonas reinhardtii
CsaV3_1G045590 Cucumis sativus L.
CsaV3_1G045610 Cucumis sativus L.
CsaV3_UNG004060 Cucumis sativus L.
CsaV3_UNG004080 Cucumis sativus L.
CSS0013071 Camellia sinensis var. sinensis
CSS0027419 Camellia sinensis var. sinensis
DCAR_006618 Daucus carota
Dinv13659 Davidia involucrata
Dinv13660 Davidia involucrata
Duzib177G1000 Durio zibethinus
ECA232G3974 Erigeron canadensis
EL10Ac4g09107 Beta vulgaris
Eucgr.B01694 Eucalyptus grandis
Eucgr.B02108 Eucalyptus grandis
FAN02G1150 Fragaria x ananassa
FAN05G0700 Fragaria x ananassa
FAN05G1843 Fragaria x ananassa
FAN09G1409 Fragaria x ananassa
FAN14G4259 Fragaria x ananassa
FvH4_6g03330 Fragaria vesca
Glyma.03G245900 Glycine max
Glyma.19G243400 Glycine max
Gohir.A11G254200 Gossypium hirsutum
Gohir.D11G264000 Gossypium hirsutum
Gorai.007G284000 Gossypium raimondii
GSVIVG01021833001 Vitis vinifera
HanXRQChr12g0379621 Helianthus annuus
Haze_04339 Corylus avellana
Haze_04340 Corylus avellana
Hma1.2p1_0083F.1_g042850 Hydrangea macrophylla
HPP92_018612 Vanilla planifolia
HPP92_028013 Vanilla planifolia
Hund06958 Selenicereus undatus
Lalb_Chr18g0045021 Lupinus albus
Lj1g0027742 Lotus japonicus
Lj7C488G4 Lonicera japonica
Lsat_1_v5_gn_5_37760 Lactuca sativa
Manes.08G132300 Manihot esculenta
Manes.09G154600 Manihot esculenta
Mapoly0019s0164 Marchantia polymorpha
Mapoly0027s0098 Marchantia polymorpha
Mapoly0081s0042 Marchantia polymorpha
Mapoly0092s0013 Marchantia polymorpha
MBI11_g02497_MAGBIO Magnolia biondii
MBI11_g10322_MAGBIO Magnolia biondii
MCO09G788 Micromonas commoda
MD04G1221700 Malus domestica
MD12G1237800 Malus domestica
Medtr7g114850 Medicago truncatula
MELO3C024669.2 Cucumis melo
Migut.B01074 Erythranthe guttata
Nitab4.5_0005059g0010 Nicotiana tabacum
Nitab4.5_0005729g0060 Nicotiana tabacum
Nitab4.5_0005729g0070 Nicotiana tabacum
Nitab4.5_0005729g0080 Nicotiana tabacum
Oeu060673.3 Olea europaea
Os01g0773000 Oryza sativa ssp. japonica
Os05g0509300 Oryza sativa ssp. japonica
Peaxi162Scf00282g00136 Petunia axillaris
PGR031G1118 Punica granatum
Phvul.006G100200 Phaseolus vulgaris
Potri.005G051400 Populus trichocarpa
Pp3c18_8560 Physcomitrium patens
PRCOL_00005025 Prasinoderma coloniale
Prupe.6G340900 Prunus persica
Psat3g008040 Pisum sativum
PSO210G1835 Papaver somniferum
PSO832G3650 Papaver somniferum
QL03p024871 Quercus lobata
RcHm_v2.0_Chr3g0451831 Rosa chinensis
Rhsim05G0160900 Rhododendron simsii
SalBow8G0563 Salvia bowleyana
Sc09g0003830 Simmondsia chinensis
Sed0015078 Sechium edule
SGA_v2.0_scaffold92G28303 Striga asiatica
SHI07786 Sapria himalayana
SMO351G0210 Selaginella moellendorffii
SMO364G0521 Selaginella moellendorffii
Solyc01g097600.2 Solanum lycopersicum
Sopen01g041220 Solanum pennellii
Sopen01g041230 Solanum pennellii
Sp3g03650 Schrenkiella parvula
TAR365G0727 Trochodendron aralioides
THA.LOC104821678 Tarenaya hassleriana
Thecc.05G287300 Theobroma cacao
Thhalv10022286m.g Eutrema salsugineum
TPR.G21485 Trifolium pratense
TPR.G6991 Trifolium pratense
unitig_37.g12634 Utricularia gibba
vmacro14215 Vaccinium macrocarpon
VMungo0222G0001 Vigna mungo
Zm00001eb054900 Zea mays
Zm00001eb281050 Zea mays
Zm00001eb328420 Zea mays
Zm00001eb352870 Zea mays

User provided reference genes

Program Settings