Gene: Zm00001eb352870

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb352870
  • Transcript Identifier Zm00001eb352870_T002
  • Gene Type Coding gene
  • Location 8 : 125157571-125161533 : negative

Gene Family Information

  • ID HOM05D005810
  • #Genes/#Species 134/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb352870_T002
  • pid Zm00001eb352870_P002
  • uniprot A0A1D6FSY6
  • uniprot A0A3L6DPL3
  • uniprot A0A1D6FSY5
  • uniprot A0A1D6FSY4
  • uniprot B8A1N8
  • uniprot A0A1D6FSY3
  • uniprot A0A1D6FSX9
  • uniprot A0A1D6FSX8
  • uniprot A0A1D6FSY2
  • uniprot A0A1D6FSY0
  • entrez 100280058
  • refseq NM_001152998.1
  • refseq NP_001146470.1
  • V4_identifier Zm00001d010714

Descriptions

  • Description Zm00001e027385
  • Description Pseudouridine synthase family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0009451
IEA
GOA DatabaseRNA modification
GO:0009451
IEA
InterProRNA modification
GO:0001522
IBA
IEA
GOA Databasepseudouridine synthesis
GO:0001522
IEA
InterPropseudouridine synthesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0009982
IBA
IEA
GOA Databasepseudouridine synthase activity
GO:0009982
IEA
InterPropseudouridine synthase activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001656 Pseudouridine synthase, TruD
IPR020103 Pseudouridine synthase, catalytic domain superfamily
Mapman id Description
16.5.3.3 RNA processing.RNA modification.pseudouridylation.tRNA pseudouridine synthase (TruD)