Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p00260 Brassica napus
A09p12910 Brassica napus
A09p58870 Brassica napus
AL3G53490 Arabidopsis lyrata
Aqoxy3G02728 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3WZ992 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EB1FDX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P2X2DJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R5MBR2 Arachis hypogaea
AT2G20490 Arabidopsis thaliana
Atru.chr12.1356 Acer truncatum
Atru.chr5.1729 Acer truncatum
BcaB03g16843 Brassica carinata
BcaB08g34911 Brassica carinata
BcaC03g16291 Brassica carinata
BcaC04g22786 Brassica carinata
BcaC06g36737 Brassica carinata
BcaC07g41214 Brassica carinata
BolC7t40500H Brassica oleracea
BolC8t51779H Brassica oleracea
BolC9t54438H Brassica oleracea
BraA07t27818Z Brassica rapa
BraA09t36936Z Brassica rapa
BraA09t41273Z Brassica rapa
C07p00540 Brassica napus
C08p42200 Brassica napus
C09p15300 Brassica napus
CAN.G1366.15 Capsicum annuum
CAN.G304.1 Capsicum annuum
CAN.G812.22 Capsicum annuum
CANSAT01G1988 Cannabis sativa
CARHR111040 Cardamine hirsuta
Carub.0003s3493 Capsella rubella
Cc08_g00200 Coffea canephora
CDE03G0454 Ceratophyllum demersum
Cfa013045 Carpinus fangiana
Ciclev10023246m.g Citrus clementina
CiPaw.04G187800 Carya illinoinensis
ClCG07G001140 Citrullus lanatus
COL.COLO4_31022 Corchorus olitorius
Cre05.g237700 Chlamydomonas reinhardtii
CsaV3_3G022140 Cucumis sativus L.
CSS0014186 Camellia sinensis var. sinensis
CSS0015227 Camellia sinensis var. sinensis
CSS0019928 Camellia sinensis var. sinensis
CSS0031432 Camellia sinensis var. sinensis
Duzib160G0066 Durio zibethinus
Duzib192G0414 Durio zibethinus
Duzib235G0343 Durio zibethinus
ECA247G3893 Erigeron canadensis
EL10As5g23481 Beta vulgaris
Eucgr.A00909 Eucalyptus grandis
FAN15G2862 Fragaria x ananassa
FAN20G2131 Fragaria x ananassa
FAN24G2571 Fragaria x ananassa
FAN27G1156 Fragaria x ananassa
FvH4_2g21220 Fragaria vesca
Glyma.03G164500 Glycine max
Glyma.19G165900 Glycine max
Gohir.A06G139500 Gossypium hirsutum
Gohir.A10G043300 Gossypium hirsutum
Gohir.D06G144100 Gossypium hirsutum
Gohir.D10G044500 Gossypium hirsutum
Gorai.010G167900 Gossypium raimondii
Gorai.011G047500 Gossypium raimondii
GSVIVG01033693001 Vitis vinifera
HanXRQChr09g0254261 Helianthus annuus
HanXRQChr10g0280801 Helianthus annuus
Haze_21406 Corylus avellana
HPP92_023430 Vanilla planifolia
Hund02922 Selenicereus undatus
Hund09610 Selenicereus undatus
Lalb_Chr07g0181091 Lupinus albus
Lalb_Chr12g0200071 Lupinus albus
Lalb_Chr13g0299521 Lupinus albus
Lj1g0019785 Lotus japonicus
Lj4g0020381 Lotus japonicus
Lsat_1_v5_gn_5_182900 Lactuca sativa
Lsat_1_v5_gn_9_10421 Lactuca sativa
Manes.13G035400 Manihot esculenta
Manes.13G035600 Manihot esculenta
Mapoly0081s0079 Marchantia polymorpha
MBI07_g16905_MAGBIO Magnolia biondii
MCO03G241 Micromonas commoda
MD05G1194800 Malus domestica
MD10G1181400 Malus domestica
Medtr7g097110 Medicago truncatula
Medtr8g069770 Medicago truncatula
MELO3C012871.2 Cucumis melo
MELO3C033129.2 Cucumis melo
Migut.N02211 Erythranthe guttata
Nitab4.5_0000326g0120 Nicotiana tabacum
Nitab4.5_0005593g0040 Nicotiana tabacum
Nitab4.5_0006107g0020 Nicotiana tabacum
Nitab4.5_0007062g0060 Nicotiana tabacum
Nn3g19695 Nelumbo nucifera
Os02g0618250 Oryza sativa ssp. japonica
Peaxi162Scf00624g00036 Petunia axillaris
PGR031G0633 Punica granatum
PGSC0003DMG400010293 Solanum tuberosum
PGSC0003DMG400025503 Solanum tuberosum
Phvul.001G162100 Phaseolus vulgaris
Phvul.007G033301 Phaseolus vulgaris
Phvul.008G022975 Phaseolus vulgaris
Phvul.011G076600 Phaseolus vulgaris
Potri.002G036500 Populus trichocarpa
Potri.005G226300 Populus trichocarpa
Pp3c19_4700 Physcomitrium patens
PRCOL_00002782 Prasinoderma coloniale
Prupe.8G221500 Prunus persica
PSO210G0272 Papaver somniferum
PSO210G6011 Papaver somniferum
PSO386G0180 Papaver somniferum
PSO386G0258 Papaver somniferum
RcHm_v2.0_Chr6g0287721 Rosa chinensis
Rhsim01G0263700 Rhododendron simsii
Sabra05G0174700 Salix brachista
SalBow6G1359 Salvia bowleyana
SalBow6G4406 Salvia bowleyana
Sed0003492 Sechium edule
Sed0004262 Sechium edule
SEGI_26494 Sequoiadendron giganteum
SMO133G0019 Selaginella moellendorffii
Solyc09g066500.4 Solanum lycopersicum
Sp3g33690 Schrenkiella parvula
TAR633G0770 Trochodendron aralioides
THA.LOC104804047 Tarenaya hassleriana
THA.LOC104814520 Tarenaya hassleriana
Thecc.06G145600 Theobroma cacao
Thhalv10002146m.g Eutrema salsugineum
TWI12G1387 Tripterygium wilfordii
TWI18G0071 Tripterygium wilfordii
TWI75G0260 Tripterygium wilfordii
unitig_0.g159 Utricularia gibba
unitig_60.g25746 Utricularia gibba

User provided reference genes

Program Settings