Gene: Solyc09g066500.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g066500.4
  • Transcript Identifier Solyc09g066500.4.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 61005173-61007179 : positive

Gene Family Information

  • ID HOM05D005783
  • #Genes/#Species 135/75
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g066500.4.1
  • uniprot A0A3Q7I4I5
  • gene_id Solyc09g066500

Descriptions

  • Description H/ACA ribonucleoprotein complex subunit 3 (AHRD V3.3 *** A0A2G3CE14_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0042254
IEA
InterProribosome biogenesis
GO:0006283
IBA
GOA Databasetranscription-coupled nucleotide-excision repair
GO:0010197
ISO
PLAZA Integrative Orthologypolar nucleus fusion AT2G20490

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030515
IEA
InterProsnoRNA binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0070615
IEA
GOA Databasenucleosome-dependent ATPase activity
GO:0008094
IBA
GOA DatabaseATPase, acting on DNA

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0015030
ISO
PLAZA Integrative OrthologyCajal body AT2G20490
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G20490

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007264 H/ACA ribonucleoprotein complex, subunit Nop10
IPR036756 H/ACA ribonucleoprotein complex, subunit Nop10 superfamily
Mapman id Description
17.1.1.2.2.1.3 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.H/ACA small nucleolar ribonucleoprotein (snoRNP) rRNA pseudouridylation complex.core component Nop10